RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SPECC1LQ69YQ0 1117 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 BRAT1Q6PJG6 821 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 TMPRSS12Q86WS5 348 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CPNE8Q86YQ8 564 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PHACTR4Q8IZ21 702 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 BBS5Q8N3I7 341 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 NIPA2Q8N8Q9 360 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 TP53I13Q8NBR0 393 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PDCD6IPQ8WUM4 868 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 NSMCE1Q8WV22 266 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CTNNBL1Q8WYA6 563 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 CENPTQ96BT3 561 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 APOLD1Q96LR9 279 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 PACSIN1Q9BY11 444 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 TCEAL2Q9H3H9 227 aaPredicted RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 GPR27Q9NS67 375 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 ZNHIT6Q9NWK9 470 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 NLGN3Q9NZ94 848 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 APOBEC3BQ9UH17 382 aaKnown RBP10.52□□□□□ -0.73
CAPN1-225ENST00000533704 ZFYVE26Q68DK2 2539 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 KIF26BQ2KJY2 2108 aa10.52□□□□□ -0.73
CAPN1-225ENST00000533704 ARHGEF17Q96PE2 2063 aaPredicted RBP10.51□□□□□ -0.73
CAPN1-225ENST00000533704 SPEGQ15772 3267 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 CPED1A4D0V7 1026 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 K7ESM1 405 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 TAF4O00268 1085 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 AQP9O43315 295 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 AKR1B10O60218 316 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 GIMD1P0DJR0 217 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ACP1P24666 158 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 MMP12P39900 470 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 MAXP61244 160 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 AP1S1P61966 158 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 YPEL5P62699 121 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ITKQ08881 620 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ILKQ13418 452 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 TRIM14Q14142 442 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 WSCD2Q2TBF2 565 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 PRRT3Q5FWE3 981 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 DENND2CQ68D51 928 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 RD3Q7Z3Z2 195 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 HID1Q8IV36 788 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAPN1-225ENST00000533704 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
CAPN1-225ENST00000533704 OR8K1Q8NGG5 319 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 HCAR2Q8TDS4 363 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 ZNF599Q96NL3 588 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 PSKH2Q96QS6 385 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 IL12RB2Q99665 862 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 DUSP23Q9BVJ7 150 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 SLC13A1Q9BZW2 595 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 EVA1BQ9NVM1 165 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 SPASTQ9UBP0 616 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 RAXQ9Y2V3 346 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 OR1A2Q9Y585 309 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 AK5Q9Y6K8 562 aa10.51□□□□□ -0.73
CAPN1-225ENST00000533704 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 MFSD11O43934 449 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 MAFKO60675 156 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 PROSCO94903 275 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ANXA6P08133 673 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ELFN1P0C7U0 828 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 CTSEP14091 401 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 HSPA9P38646 679 aaKnown RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 MMP13P45452 471 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 DUSP3P51452 185 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 POLR2LP62875 67 aaKnown RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 E2F1Q01094 437 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 PPARDQ03181 441 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 NSUN2Q08J23 767 aaKnown RBP eCLIP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 INPP5AQ14642 412 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 MESDQ14696 234 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ACOX1Q15067 660 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 SLC18A3Q16572 532 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 CDKN3Q16667 212 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 C19orf48Q6RUI8 117 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 CRTC1Q6UUV9 634 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ENPP7Q6UWV6 458 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 MACC1Q6ZN28 852 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 PGBD5Q8N414 524 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 KCTD6Q8NC69 237 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 BTN2A2Q8WVV5 523 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 TSACCQ96A04 125 aaPredicted RBP10.5□□□□□ -0.73
CAPN1-225ENST00000533704 NSMCE3Q96MG7 304 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 APOOQ9BUR5 198 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 LRRC61Q9BV99 259 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 ABCG4Q9H172 646 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 NT5MQ9NPB1 228 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 SPTLC3Q9NUV7 552 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
CAPN1-225ENST00000533704 NENFQ9UMX5 172 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms