RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 LZTS3O60299 673 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 BRINP1O60477 761 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 LRCH4O75427 683 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 GCATO75600 419 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 SKILP12757 684 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 C6P13671 934 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ARL4AP40617 200 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 LIG3P49916 1009 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 RENBPP51606 427 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 BCL2L1Q07817 233 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 IL10RBQ08334 325 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 AGERQ15109 404 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ELOCQ15369 112 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 NR0B2Q15466 257 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 WSCD2Q2TBF2 565 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 AFMIDQ63HM1 303 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 CAMK1DQ8IU85 385 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 SDR16C5Q8N3Y7 309 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 FSTL5Q8N475 847 aaPredicted RBP12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 TRIM7Q9C029 511 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 ATP8A1Q9Y2Q0 1164 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 U3KQA8 63 aa12.51□□□□□ -0.41
CAPRIN1-213ENST00000533562 PTPRQQ9UMZ3 2332 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 H3BRJ5 948 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 YY2O15391 372 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 TLX3O43711 291 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 USP12O75317 370 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 ALPIP09923 528 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 CTSEP14091 401 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 TSHRP16473 764 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 SCNN1BP51168 640 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 HK3P52790 923 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 C1orf61Q13536 156 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 INPP5AQ14642 412 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 IQCB1Q15051 598 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 IRF4Q15306 451 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 TBC1D25Q3MII6 688 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 TMCO4Q5TGY1 634 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 E4F1Q66K89 784 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 EFL1Q7Z2Z2 1120 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 ARHGAP12Q8IWW6 846 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 RBFAQ8N0V3 343 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 NAT6Q93015 286 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 APOOQ9BUR5 198 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 BOCQ9BWV1 1114 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 TCEAL2Q9H3H9 227 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 COQ6Q9Y2Z9 468 aa12.5□□□□□ -0.41
CAPRIN1-213ENST00000533562 KALRNO60229 2985 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 RP1P56715 2156 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 A0A1W2PQJ5 194 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 MUSKO15146 869 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 RASGRP1O95267 797 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 MMP12P39900 470 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 RGRP47804 291 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 LSSP48449 732 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 UBASH3AP57075 661 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 AP1S1P61966 158 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 DPYSQ14117 519 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 LBRQ14739 615 aaKnown RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 NFATC4Q14934 902 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 DPYSL2Q16555 572 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 GUSBP11Q6P575 273 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 ENPP7Q6UWV6 458 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 RD3Q7Z3Z2 195 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 HID1Q8IV36 788 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 NPWQ8N729 165 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 ECHDC3Q96DC8 303 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 PSKH2Q96QS6 385 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 PCDHB1Q9Y5F3 818 aa12.49□□□□□ -0.41
CAPRIN1-213ENST00000533562 MGAQ8IWI9 3026 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 A0A1W2PQ67 120 aa12.48□□□□□ -0.41
CAPRIN1-213ENST00000533562 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms