RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 ERMP1Q7Z2K6 904 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 ZNF467Q7Z7K2 595 aaPredicted RBP16.73■□□□□ 0.27
CTSB-228ENST00000533455 ARHGAP12Q8IWW6 846 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 ATPAF2Q8N5M1 289 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 TMIGD2Q96BF3 282 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 ROPN1LQ96C74 230 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 CIB1Q99828 191 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 CAAP1Q9H8G2 361 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 CLK4Q9HAZ1 481 aaKnown RBP16.73■□□□□ 0.27
CTSB-228ENST00000533455 PTCH2Q9Y6C5 1203 aa16.73■□□□□ 0.27
CTSB-228ENST00000533455 NYNRINQ9P2P1 1898 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 GPC4O75487 556 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 RBP1P09455 135 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 HSPA8P11142 646 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 CYP2C18P33260 490 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 CLCN5P51795 746 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ADARP55265 1226 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 TAC4Q86UU9 113 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 DHFR2Q86XF0 187 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 SLC22A9Q8IVM8 553 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 MFSD2AQ8NA29 543 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ARRDC4Q8NCT1 418 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 TFAP2CQ92754 450 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.275e-29■■■■■ 114
CTSB-228ENST00000533455 ITFG2Q969R8 447 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ZUFSPQ96AP4 578 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ZNF419Q96HQ0 510 aaPredicted RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 TCF12Q99081 682 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 GSTO2Q9H4Y5 243 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 NOL11Q9H8H0 719 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 TMEM30AQ9NV96 361 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ARHGEF38Q9NXL2 777 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 MIA3Q5JRA6 1907 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 BBIP1A8MTZ0 92 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 PLOD2O00469 737 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 STAMBPO95630 424 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 SMPD1P17405 629 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 EPHX2P34913 555 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 NDST2P52849 883 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 SNX17Q15036 470 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ZNF280DQ6N043 979 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 NEPROQ6NW34 567 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 CYP2R1Q6VVX0 501 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ZBTB49Q6ZSB9 765 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 LARP4Q71RC2 724 aaKnown RBP eCLIP16.72■□□□□ 0.272e-15■□□□□ 11
CTSB-228ENST00000533455 CTU1Q7Z7A3 348 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 OLFM1Q99784 485 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 MTF2Q9Y483 593 aaPredicted RBP16.72■□□□□ 0.27
CTSB-228ENST00000533455 IPPQ9Y573 584 aa16.72■□□□□ 0.27
CTSB-228ENST00000533455 ZNF839A8K0R7 811 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 DFFAO00273 331 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 MATN3O15232 486 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 SLC7A2P52569 658 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 PRKCQQ04759 706 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 INTS11Q5TA45 600 aaKnown RBP16.71■□□□□ 0.27
CTSB-228ENST00000533455 CYHR1Q6ZMK1 362 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTSB-228ENST00000533455 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 EDEM1Q92611 657 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 PPP1R14BQ96C90 147 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 TSPAN17Q96FV3 270 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 PCED1BQ96HM7 432 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 UBXN10Q96LJ8 280 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 DNAAF2Q9NVR5 837 aaKnown RBP16.71■□□□□ 0.27
CTSB-228ENST00000533455 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
CTSB-228ENST00000533455 TRAF6Q9Y4K3 522 aa16.71■□□□□ 0.27
CTSB-228ENST00000533455 ZNF701M0R085 212 aaPredicted RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 SOCS2O14508 198 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 PTGESO14684 152 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 AURKAO14965 403 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 MAFKO60675 156 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 PFDN1O60925 122 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 TIPRLO75663 272 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 SMIM10L2AP0DMW4 78 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 SMIM10L2BP0DMW5 78 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 ATP6V1B2P21281 511 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 HOXC13P31276 330 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 LEPRP48357 1165 aaKnown RBP16.7■□□□□ 0.26
CTSB-228ENST00000533455 LHX1P48742 406 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 ACAP2Q15057 778 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 RANBP10Q6VN20 620 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 GALNT7Q86SF2 657 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 TMEM86AQ8N2M4 240 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 GOLM1Q8NBJ4 401 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 NLGN2Q8NFZ4 835 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 GRIN3AQ8TCU5 1115 aa16.7■□□□□ 0.26
CTSB-228ENST00000533455 CALML6Q8TD86 181 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms