RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RPL7AP62424 266 aaKnown RBP18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 CCL7P80098 99 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 INPP5AQ14642 412 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 NFATC4Q14934 902 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 UGP2Q16851 508 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 ZSCAN23Q3MJ62 389 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 PARP15Q460N3 678 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 INO80CQ6PI98 192 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 MON1BQ7L1V2 547 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 ZSWIM9Q86XI8 627 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 SDR16C5Q8N3Y7 309 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 CCDC97Q96F63 343 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 MCEEQ96PE7 176 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 APOOQ9BUR5 198 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 SUV39H2Q9H5I1 410 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 UBA2Q9UBT2 640 aaPredicted RBP18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 GPR34Q9UPC5 381 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 DAAM1Q9Y4D1 1078 aa18.58■□□□□ 0.56
SSSCA1-206ENST00000531405 TCRBV5S1A1TA0A578 114 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 TSPAN11A1L157 253 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 PYCARD-AS1I3L0S3 204 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 J3KR12 359 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 J3QKU1 62 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 BUB1BO60566 1050 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 RASGRP1O95267 797 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 ITGA2BP08514 1039 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 ALPIP09923 528 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 HGFP14210 728 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 LIG3P49916 1009 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 ZNF143P52747 638 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 SRP54P61011 504 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 SYCP1Q15431 976 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 FKBP15Q5T1M5 1219 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 DNAJC24Q6P3W2 148 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 CCDC81Q6ZN84 652 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 DNAAF5Q86Y56 855 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 UMODL1-AS1Q8N2C9 162 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 ENOX1Q8TC92 643 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 SCG3Q8WXD2 468 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 PDXPQ96GD0 296 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 LIN37Q96GY3 246 aaPredicted RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 CELF6Q96J87 481 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 GFM1Q96RP9 751 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 CATSPERBQ9H7T0 1116 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 PDFQ9HBH1 243 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 GPATCH2LQ9NWQ4 482 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 KLQ9UEF7 1012 aa18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 ZFC3H1O60293 1989 aaKnown RBP18.57■□□□□ 0.56
SSSCA1-206ENST00000531405 A0A1W2PQM1 296 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 CAPN8A6NHC0 703 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 TMEM110-MUSTN1A8MSY1 372 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 WASH4PA8MWX3 477 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 D6RAR5 112 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 AGRPO00253 132 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 PLD2O14939 933 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 RPLP0P05388 317 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 HTR1BP28222 390 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 MMP12P39900 470 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 RGRP47804 291 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 SUOXP51687 545 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 CT47A1Q5JQC4 288 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 LVRNQ6Q4G3 990 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 GKN2Q86XP6 184 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 CAMK1DQ8IU85 385 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 SFTPA2Q8IWL1 248 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 PLA2G15Q8NCC3 412 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 LRRC19Q9H756 370 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 FANCLQ9NW38 375 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 CHMP5Q9NZZ3 219 aa18.56■□□□□ 0.56
SSSCA1-206ENST00000531405 TPM2P07951 284 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 SLC5A2P31639 672 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 UGT1A5P35504 534 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 MLLT3P42568 568 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 TPI1P60174 286 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 OGDHQ02218 1023 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 PPP1R15BQ5SWA1 713 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 CFAP58Q5T655 872 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 ERAP2Q6P179 960 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 RAB11FIP2Q7L804 512 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 JAMLQ86YT9 394 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 FBXO39Q8N4B4 442 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 HCAR2Q8TDS4 363 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 WDR92Q96MX6 357 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 CNPY3Q9BT09 278 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
SSSCA1-206ENST00000531405 BSNQ9UPA5 3926 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 ANKRD62A6NC57 917 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 FGF10O15520 208 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 EFSO43281 561 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 PRAMEF11O60813 436 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 COPB1P53618 953 aaKnown RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 INHBCP55103 352 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 SRSF6Q13247 344 aaKnown RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 GRM3Q14832 879 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 TGIF1Q15583 401 aa18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 Q8N9G6 341 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 TSEN2Q8NCE0 465 aaKnown RBP18.54■□□□□ 0.56
SSSCA1-206ENST00000531405 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms