RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LSMEM2Q8N112 164 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 TSEN2Q8NCE0 465 aaKnown RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 TPCN2Q8NHX9 752 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 GLMNQ92990 594 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 ZNF578Q96N58 590 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-205ENST00000531042 POLR1BQ9H9Y6 1135 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
CPSF1-205ENST00000531042 A0A1W2PQC6 194 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 DDX3XO00571 662 aaKnown RBP eCLIP15.9■□□□□ 0.147e-33■■■■■ 28
CPSF1-205ENST00000531042 MUSKO15146 869 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 PRPSAP2O60256 369 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 SERPINA4P29622 427 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 MMP12P39900 470 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 HCAR3P49019 387 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 RPIAP49247 311 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 BLKP51451 505 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 HK3P52790 923 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 NSUN2Q08J23 767 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 INPP5AQ14642 412 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 PPP6R3Q5H9R7 873 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 PERM1Q5SV97 790 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 ARHGAP36Q6ZRI8 547 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 NPWQ8N729 165 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 UBL7Q96S82 380 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 APOOQ9BUR5 198 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 CINPQ9BW66 212 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 ATP13A3Q9H7F0 1226 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 CNOT8Q9UFF9 292 aaKnown RBP15.9■□□□□ 0.14
CPSF1-205ENST00000531042 ATP8A1Q9Y2Q0 1164 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 LRP4O75096 1905 aa15.9■□□□□ 0.14
CPSF1-205ENST00000531042 RP1P56715 2156 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 FASNP49327 2511 aaKnown RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 A0A1B0GTH6 734 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 CFAP69A5D8W1 941 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 DFFAO00273 331 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 LRCH4O75427 683 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 PRKCGP05129 697 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 CELA2BP08218 269 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 HTR1BP28222 390 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ZNF135P52742 658 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 TLE3Q04726 772 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 IL10RBQ08334 325 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 RFTN1Q14699 578 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 NFATC4Q14934 902 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ELOCQ15369 112 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ALG11Q2TAA5 492 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ENPP7Q6UWV6 458 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 RBM44Q6ZP01 1051 aaKnown RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 HID1Q8IV36 788 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 SPACA3Q8IXA5 215 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 FSTL5Q8N475 847 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ZNF248Q8NDW4 579 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 NAT6Q93015 286 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 TSACCQ96A04 125 aaPredicted RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ZNF653Q96CK0 615 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 GRAMD1AQ96CP6 724 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ECHDC3Q96DC8 303 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 HIC2Q96JB3 615 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 SP110Q9HB58 689 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 CWC15Q9P013 229 aaKnown RBP15.89■□□□□ 0.13
CPSF1-205ENST00000531042 PADI4Q9UM07 663 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 OR1A2Q9Y585 309 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 ENTPD2Q9Y5L3 495 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 SCINQ9Y6U3 715 aa15.89■□□□□ 0.13
CPSF1-205ENST00000531042 PTPRQQ9UMZ3 2332 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 TCEA3O75764 348 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 RASGRP1O95267 797 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ALPIP09923 528 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 SKILP12757 684 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 CTSEP14091 401 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ZNF165P49910 485 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 PCBP4P57723 403 aaKnown RBP15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ERVPABLB-1P60509 514 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 BCL2L1Q07817 233 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 RALGDSQ12967 914 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 MTM1Q13496 603 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 DPYSQ14117 519 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ESRP1Q6NXG1 681 aaKnown RBP15.88■□□□□ 0.13
CPSF1-205ENST00000531042 LVRNQ6Q4G3 990 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 NYAP1Q6ZVC0 841 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 SDR16C5Q8N3Y7 309 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 PLA2G15Q8NCC3 412 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 TRIM11Q96F44 468 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 NSMCE3Q96MG7 304 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 FCRL3Q96P31 734 aaPredicted RBP15.88■□□□□ 0.13
CPSF1-205ENST00000531042 LGMNQ99538 433 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ISCUQ9H1K1 167 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 MRPL47Q9HD33 250 aaKnown RBP15.88■□□□□ 0.13
CPSF1-205ENST00000531042 ASCL3Q9NQ33 180 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 MYO1AQ9UBC5 1043 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 DOLKQ9UPQ8 538 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 SATB2Q9UPW6 733 aa15.88■□□□□ 0.13
CPSF1-205ENST00000531042 KALRNO60229 2985 aa15.87■□□□□ 0.13
CPSF1-205ENST00000531042 A0A1W2PNU3 283 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms