RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MSH2P43246 934 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 CLCN5P51795 746 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 SOX10P56693 466 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TFAP4Q01664 338 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 MYBPC2Q14324 1141 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 ADIPOQQ15848 244 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TCTN1Q2MV58 587 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 CERKLQ49MI3 558 aaPredicted RBP6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 QSOX2Q6ZRP7 698 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 CCDC186Q7Z3E2 898 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 NOXA1Q86UR1 476 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TMC8Q8IU68 726 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 THNSL1Q8IYQ7 743 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 OR8H3Q8N146 312 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 OR6J1Q8NGC5 347 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 GOT1L1Q8NHS2 421 aaPredicted RBP6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 GSDMBQ8TAX9 411 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 ZNF398Q8TD17 642 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 C20orf173Q96LM9 149 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 JAKMIP1Q96N16 626 aaKnown RBP6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 DGAT2Q96PD7 388 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TIMP4Q99727 224 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 TUBB6Q9BUF5 446 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 MOV10Q9HCE1 1003 aaKnown RBP6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 IL17RBQ9NRM6 502 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 SERGEFQ9UGK8 458 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 ANAPC2Q9UJX6 822 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 MAU2Q9Y6X3 613 aa6.6□□□□□ -1.35
CAPRIN1-208ENST00000530008 A0A096LPK6 155 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 TRBV5-7A0A0A0MS05 114 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 URADA6NGE7 173 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 SMIM22K7EJ46 135 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CHL1O00533 1208 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 RNF8O76064 485 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 IFNAR1P17181 557 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 SRD5A1P18405 259 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CPT2P23786 658 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 GPR12P47775 334 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 PLIN5Q00G26 463 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 PMPCAQ10713 525 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 GRAPQ13588 217 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 USP41Q3LFD5 358 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CDONQ4KMG0 1287 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 C6orf141Q5SZD1 244 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 KRT79Q5XKE5 535 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CES5AQ6NT32 575 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 AMIGO2Q86SJ2 522 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CHSY1Q86X52 802 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 RNF168Q8IYW5 571 aaPredicted RBP6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 PNLDC1Q8NA58 520 aaKnown RBP6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 GJC3Q8NFK1 279 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 LRRC59Q96AG4 307 aaKnown RBP6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 RNF183Q96D59 192 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 SEPT5Q99719 369 aaPredicted RBP6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 C1QTNF1Q9BXJ1 281 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 OPA3Q9H6K4 179 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CPNE5Q9HCH3 593 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 MAGEE1Q9HCI5 957 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 ABCF3Q9NUQ8 709 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 PLEKHB1Q9UF11 243 aaPredicted RBP6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CMAHPQ9Y471 501 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 CEPT1Q9Y6K0 416 aa6.59□□□□□ -1.35
CAPRIN1-208ENST00000530008 FLT1P17948 1338 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 ZNF644Q9H582 1327 aaPredicted RBP6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 A0A0U1RQF3 1178 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 DPPA5A6NC42 116 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 LRRC72A6NJI9 287 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 KLK8O60259 260 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 AVILO75366 819 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CYP2A6P11509 494 aaPredicted RBP6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 WT1P19544 449 aaPredicted RBP6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 MAKP20794 623 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 BMP5P22003 454 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CIITAP33076 1130 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SLC16A2P36021 539 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CXCR3P49682 368 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SLC12A2P55011 1212 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 RBP5P82980 135 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SNTB1Q13884 538 aaKnown RBP6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 KRT24Q2M2I5 525 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 ALG10Q5BKT4 473 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 IGSF11Q5DX21 431 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 ALG10BQ5I7T1 473 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 HECTD2Q5U5R9 776 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CHST3Q7LGC8 479 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SERPINA11Q86U17 422 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 AACSQ86V21 672 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CCDC13Q8IYE1 715 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 MCPH1Q8NEM0 835 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CMASQ8NFW8 434 aaPredicted RBP6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 ZNF622Q969S3 477 aaKnown RBP eCLIP6.58□□□□□ -1.365e-13■■□□□ 13.4
CAPRIN1-208ENST00000530008 UROC1Q96N76 676 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 PIMREGQ9BSJ6 248 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 EFHD1Q9BUP0 239 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 CCDC106Q9BWC9 280 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 PSD3Q9NYI0 1048 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SELENONQ9NZV5 590 aa6.58□□□□□ -1.36
CAPRIN1-208ENST00000530008 SLC17A6Q9P2U8 582 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms