RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PCNAP12004 261 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ALOX15P16050 662 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 CALB2P22676 271 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 DET1Q7L5Y6 550 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ADAMTSL2Q86TH1 951 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ZNF398Q8TD17 642 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 BADQ92934 168 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ZNF599Q96NL3 588 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ECSITQ9BQ95 431 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 A0A1W2PPM1 405 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 MGAT4DA6NG13 374 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 TMEM114B3SHH9 223 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 SLC9A4Q6AI14 798 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 CERS6Q6ZMG9 384 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 PIWIL4Q7Z3Z4 852 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 CMC1Q7Z7K0 106 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 PTGR2Q8N8N7 351 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 MFSD1Q9H3U5 465 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 COPS7BQ9H9Q2 264 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 MAN1C1Q9NR34 630 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP47-207ENST00000527733 GNG14A0A1W2PPG7 69 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 MGEA5O60502 916 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 SLC25A14O95258 325 aaPredicted RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 EPHX1P07099 455 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 EEF1B2P24534 225 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 PDK4Q16654 411 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ATP6AP1LQ52LC2 224 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ARCQ7LC44 396 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 COLGALT2Q8IYK4 626 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 PIWIL2Q8TC59 973 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 PIWIL1Q96J94 861 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 TBATAQ96M53 351 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 C17orf80Q9BSJ5 609 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 THUMPD3Q9BV44 507 aaKnown RBP15.15■□□□□ 0.02
USP47-207ENST00000527733 PARVBQ9HBI1 364 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 ABCB8Q9NUT2 735 aa15.15■□□□□ 0.02
USP47-207ENST00000527733 BEST1O76090 585 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 C2P06681 752 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 AGKQ53H12 422 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 KIAA0408Q6ZU52 694 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 OVCA2Q8WZ82 227 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 CD101Q93033 1021 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 RPL10LQ96L21 214 aaKnown RBP15.14■□□□□ 0.01
USP47-207ENST00000527733 WDR41Q9HAD4 459 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 TAGLN3Q9UI15 199 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 TMCO1Q9UM00 188 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 BACE2Q9Y5Z0 518 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 RPL14P50914 215 aaKnown RBP15.14■□□□□ 0.01
USP47-207ENST00000527733 NME5P56597 212 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 ELP6Q0PNE2 266 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 ANKLE1Q8NAG6 615 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 DTX3LQ8TDB6 740 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 HEXDCQ8WVB3 486 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 ATL1Q8WXF7 558 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 TMEM109Q9BVC6 243 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 XPR1Q9UBH6 696 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 SPACA6W5XKT8 324 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 LAMB1P07942 1786 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 DOCK2Q92608 1830 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 FCHO1O14526 889 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 TMEM63AO94886 807 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 UBOX5O94941 541 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 CYP11A1P05108 521 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 SLC2A4P14672 509 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 ESRRGP62508 458 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 PAFAH1B3Q15102 231 aaKnown RBP15.14■□□□□ 0.01
USP47-207ENST00000527733 TEX9Q8N6V9 391 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 OR52K2Q8NGK3 314 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 PIP4K2CQ8TBX8 421 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 RDH11Q8TC12 318 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 KCNV2Q8TDN2 545 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 HEPHQ9BQS7 1158 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 RMND5AQ9H871 391 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 CYTH4Q9UIA0 394 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 SCOCQ9UIL1 159 aa15.14■□□□□ 0.01
USP47-207ENST00000527733 GLYATL1P3A0A0U1RQE8 302 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 TIMP1P01033 207 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 SOAT1P35610 550 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 SPATA17Q96L03 361 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 PEBP4Q96S96 227 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 TDP1Q9NUW8 608 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 AHSPQ9NZD4 102 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 ZNF839A8K0R7 811 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 PER2O15055 1255 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 NAA20P61599 178 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 BST1Q10588 318 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 MAD2L1Q13257 205 aaPredicted RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 OASLQ15646 514 aaKnown RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 RRM2BQ7LG56 351 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 PKMP14618 531 aaKnown RBP15.13■□□□□ 0.01
USP47-207ENST00000527733 CSKP41240 450 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 RTP2Q5QGT7 225 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 TSTD2Q5T7W7 516 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■■■■□ 23.7
USP47-207ENST00000527733 ANKS1BQ7Z6G8 1248 aa15.13■□□□□ 0.01
USP47-207ENST00000527733 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms