RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GALNT7Q86SF2 657 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 KBTBD6Q86V97 674 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 RNF135Q8IUD6 432 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 HIPK4Q8NE63 616 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 RCN3Q96D15 328 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 GPR62Q9BZJ7 368 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 RNF186Q9NXI6 227 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 MARCH2Q9P0N8 246 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 MARCH4Q9P2E8 410 aaPredicted RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 SUFUQ9UMX1 484 aa17.69■□□□□ 0.42
USH1C-205ENST00000527020 COPG1Q9Y678 874 aaKnown RBP17.69■□□□□ 0.42
USH1C-205ENST00000527020 OR51F1A6NGY5 319 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 S1PR4O95977 384 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 HMBSP08397 361 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 LTA4HP09960 611 aaKnown RBP17.68■□□□□ 0.42
USH1C-205ENST00000527020 CCDC166P0CW27 439 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 ACVRL1P37023 503 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 ETFBP38117 255 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 CDKN2DP55273 166 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 SERINC3Q13530 473 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 HERC3Q15034 1050 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 FAM83EQ2M2I3 478 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 NXNQ6DKJ4 435 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 RPS27LQ71UM5 84 aaKnown RBP17.68■□□□□ 0.42
USH1C-205ENST00000527020 KYQ8NBH2 561 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 HDAC10Q969S8 669 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 MFSD1Q9H3U5 465 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 CYP4F12Q9HCS2 524 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 DONSONQ9NYP3 566 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 PRPF19Q9UMS4 504 aaKnown RBP17.68■□□□□ 0.42
USH1C-205ENST00000527020 SLC27A5Q9Y2P5 690 aa17.68■□□□□ 0.42
USH1C-205ENST00000527020 MUSKO15146 869 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 SP100P23497 879 aaPredicted RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 IL10RBQ08334 325 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 POLD3Q15054 466 aaPredicted RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 AGAP9Q5VTM2 703 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 FAM171A1Q5VUB5 890 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 NADSYN1Q6IA69 706 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 RSPO2Q6UXX9 243 aaPredicted RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 PELI3Q8N2H9 469 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 DLGAP2Q9P1A6 1054 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 STK39Q9UEW8 545 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 SLC12A8A0AV02 714 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 IPO13O94829 963 aaKnown RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 ARSAP15289 507 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 DPP6P42658 865 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 C10orf120Q5SQS8 335 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 LPCAT4Q643R3 524 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 C16orf89Q6UX73 402 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 SETD3Q86TU7 594 aaPredicted RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 ZNF354CQ86Y25 554 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 FAM193BQ96PV7 902 aaPredicted RBP17.67■□□□□ 0.42
USH1C-205ENST00000527020 GTSE1Q9NYZ3 720 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 VWA7Q9Y334 891 aa17.67■□□□□ 0.42
USH1C-205ENST00000527020 TRPC5OSA6NMA1 111 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 RAMP2O60895 175 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 SNUPNO95149 360 aaKnown RBP17.66■□□□□ 0.42
USH1C-205ENST00000527020 RAG1P15918 1043 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 KCNC1P48547 511 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 THOP1P52888 689 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ARPP19P56211 112 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ZNF423Q2M1K9 1284 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 PIGGQ5H8A4 983 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 FAM219BQ5XKK7 198 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 OR52E8Q6IFG1 317 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 RNF180Q86T96 592 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 PDSS2Q86YH6 399 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 OR6P1Q8NGX9 317 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 RPRD1AQ96P16 312 aaPredicted RBP17.66■□□□□ 0.42
USH1C-205ENST00000527020 TLR8Q9NR97 1041 aaKnown RBP17.66■□□□□ 0.42
USH1C-205ENST00000527020 OLA1Q9NTK5 396 aaKnown RBP17.66■□□□□ 0.42
USH1C-205ENST00000527020 VPS28Q9UK41 221 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 MTMR11A4FU01 709 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 TCAF2A6NFQ2 919 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 PLK1P53350 603 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ACVR1Q04771 509 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ACAP2Q15057 778 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 GSTA3Q16772 222 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 PARP15Q460N3 678 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 SFT2D3Q587I9 215 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 PIM3Q86V86 326 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 TSPAN17Q96FV3 270 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 CDRT15Q96T59 188 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 SEMA3CQ99985 751 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 CCSER2Q9H7U1 834 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 MARCH5Q9NX47 278 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ZDHHC7Q9NXF8 308 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 HCSTQ9UBK5 93 aa17.66■□□□□ 0.42
USH1C-205ENST00000527020 ANKRD36A6QL64 1941 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 GBF1Q92538 1859 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 OR6C75A6NL08 312 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 RTN3O95197 1032 aaPredicted RBP17.65■□□□□ 0.42
USH1C-205ENST00000527020 PEX2P28328 305 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 GATMP50440 423 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
USH1C-205ENST00000527020 SATB1Q01826 763 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 PTPRCAPQ14761 206 aa17.65■□□□□ 0.42
USH1C-205ENST00000527020 LRRC36Q1X8D7 754 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms