RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PSMD12O00232 456 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 UBDO15205 165 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 LTA4HP09960 611 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ODC1P11926 461 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ATP6V1B1P15313 513 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 HTR7P34969 479 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 LEPRP48357 1165 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CPT1AP50416 773 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CLCN5P51795 746 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SH3BGRP55822 239 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 WNT3AP56704 352 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MAPRE2Q15555 327 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SLC14A2Q15849 920 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 AGKQ53H12 422 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 KLHDC10Q6PID8 442 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 AGMOQ6ZNB7 445 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 BEND5Q7L4P6 421 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ARHGAP22Q7Z5H3 698 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CHERPQ8IWX8 916 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 B4GALNT2Q8NHY0 566 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ANKRD49Q8WVL7 239 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CASP10Q92851 521 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 TOP1MTQ969P6 601 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SLCO4A1Q96BD0 722 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MPP4Q96JB8 637 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 FCRL2Q96LA5 508 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 PRPF18Q99633 342 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 GSTO2Q9H4Y5 243 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 TBC1D13Q9NVG8 400 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 EPS15L1Q9UBC2 864 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CENPFP49454 3210 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 PRORSD1PA6NEY8 169 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CCDC166P0CW27 439 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 STX5Q13190 355 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MYLK3Q32MK0 819 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 C6orf10Q5SRN2 563 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 AGAP9Q5VTM2 703 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 TIGD7Q6NT04 549 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CYHR1Q6ZMK1 362 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 C14orf80Q86SX3 495 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 LRRTM3Q86VH5 581 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 AFAP1L2Q8N4X5 818 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CCDC126Q96EE4 140 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 UBXN10Q96LJ8 280 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ACBD6Q9BR61 282 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 SEMA6AQ9H2E6 1030 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ZNF408Q9H9D4 720 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 ATP13A1Q9HD20 1204 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 CCDC167Q9P0B6 97 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-201ENST00000526704 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
LINC01001-201ENST00000526704 A0A1B0GTW7 788 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 HEATR9A2RTY3 570 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 C7orf72A4D263 438 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 E9PAM4 449 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 UBFD1O14562 309 aaKnown RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 WISP3O95389 354 aaPredicted RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 PEX11BO96011 259 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 CCR1P32246 355 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 BRCC3P46736 316 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 HECTD2Q5U5R9 776 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 C8orf82Q6P1X6 216 aaPredicted RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 RTL3Q8N8U3 475 aaKnown RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 LPGAT1Q92604 370 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 PHF21BQ96EK2 531 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 NOL6Q9H6R4 1146 aaKnown RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 CROCCQ5TZA2 2017 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 TCRBV3S1A0A5B6 114 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 CSPG5O95196 566 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 FGFR3P22607 806 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 YWHAQP27348 245 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 RHDQ02161 417 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 GALNT1Q10472 559 aaPredicted RBP11.72□□□□□ -0.53
LINC01001-201ENST00000526704 NRF1Q16656 503 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 MORN1Q5T089 497 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 C9orf131Q5VYM1 1079 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 KLC3Q6P597 504 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 TMEM207Q6UWW9 146 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 OR9I1Q8NGQ6 314 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 EME1Q96AY2 570 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 ZNF597Q96LX8 424 aa11.72□□□□□ -0.53
LINC01001-201ENST00000526704 RANBP9Q96S59 729 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms