RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 HLA-DPA1P20036 260 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 ACSL1P33121 698 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 NUDT1P36639 197 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 RPL6Q02878 288 aaKnown RBP18.83■□□□□ 0.6
PTPRK-218ENST00000525459 SEMA5AQ13591 1074 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 ELF2Q15723 593 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 KDELC1Q6UW63 502 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 MCCC1Q96RQ3 725 aaPredicted RBP18.83■□□□□ 0.6
PTPRK-218ENST00000525459 TRIB3Q96RU7 358 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 FADS3Q9Y5Q0 445 aa18.83■□□□□ 0.6
PTPRK-218ENST00000525459 CACNA1HO95180 2353 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.82■□□□□ 0.6
PTPRK-218ENST00000525459 A0A0J9YYE9 177 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 LOC285095A0A1B0GVY8 99 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 E7EVH7 732 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 H0Y858 1186 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 NEMP1O14524 444 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 TRBC1P01850 177 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 KRT14P02533 472 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 FGF1P05230 155 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 TIMP2P16035 220 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 MMP12P39900 470 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 ABL2P42684 1182 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 WNT3AP56704 352 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 TCF15Q12870 199 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 PPP1R7Q15435 360 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 PCSK7Q16549 785 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 NAPEPLDQ6IQ20 393 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 CEP68Q76N32 757 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 LPCAT2Q7L5N7 544 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 LINC00523Q86TU6 105 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 TRIM69Q86WT6 500 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 ZSWIM9Q86XI8 627 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 IPMKQ8NFU5 416 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 PIH1D2Q8WWB5 315 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 RMDN1Q96DB5 314 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 SCRN2Q96FV2 425 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 ZC3H10Q96K80 434 aaKnown RBP18.82■□□□□ 0.6
PTPRK-218ENST00000525459 MRGPRX2Q96LB1 330 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
PTPRK-218ENST00000525459 EIF2B3Q9NR50 452 aaKnown RBP18.82■□□□□ 0.6
PTPRK-218ENST00000525459 RAB6BQ9NRW1 208 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 CHKBQ9Y259 395 aa18.82■□□□□ 0.6
PTPRK-218ENST00000525459 SCN8AQ9UQD0 1980 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 CAPN8A6NHC0 703 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 ANKRD66B4E2M5 251 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 RIOK3O14730 519 aaKnown RBP18.81■□□□□ 0.6
PTPRK-218ENST00000525459 RHOBTB1O94844 696 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 METTL18O95568 372 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 AP2A1O95782 977 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 RPL22P35268 128 aaKnown RBP18.81■□□□□ 0.6
PTPRK-218ENST00000525459 DPP6P42658 865 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 TAS2R38P59533 333 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 DR1Q01658 176 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 IHHQ14623 411 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 DPPA4Q7L190 304 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 FAM160A2Q8N612 972 aaPredicted RBP18.81■□□□□ 0.6
PTPRK-218ENST00000525459 LPCAT1Q8NF37 534 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 LYSMD1Q96S90 227 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 GORASP1Q9BQQ3 440 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 GPR174Q9BXC1 333 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 SEMA4AQ9H3S1 761 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 PCDH12Q9NPG4 1184 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 UBP1Q9NZI7 540 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 MBD1Q9UIS9 605 aaPredicted RBP18.81■□□□□ 0.6
PTPRK-218ENST00000525459 ABCA7Q8IZY2 2146 aa18.81■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3DA0A087WVF3 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3IA0A087WXS9 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3EA0A087X179 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3KA0A087X1G2 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3FA6NER0 549 aaPredicted RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3LB9A6J9 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PLK4O00444 970 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PRLP01236 227 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PDHA1P08559 390 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3HP0C7X1 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 ZNF30P17039 623 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 CCR5P51681 352 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 RPS21P63220 83 aaKnown RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 CDK16Q00536 496 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PTK6Q13882 451 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TMEM52BQ4KMG9 183 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PMS2CLQ68D20 193 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 KCTD11Q693B1 232 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3GQ6DHY5 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3CQ6IPX1 549 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 MAATS1Q7Z4T9 603 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 RAVER1Q8IY67 606 aaKnown RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 TBC1D3Q8IZP1 549 aaPredicted RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 MLPHQ9BV36 600 aaPredicted RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 EPC1Q9H2F5 836 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 AP3B1O00203 1094 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PSMD11O00231 422 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 NDC80O14777 642 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 HRO43593 1189 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 PCDH8O95206 1070 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 VIPR1P32241 457 aa18.8■□□□□ 0.6
PTPRK-218ENST00000525459 BASP1P80723 227 aaKnown RBP18.8■□□□□ 0.6
PTPRK-218ENST00000525459 SIM2Q14190 667 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms