RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SLC25A51Q9H1U9 297 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 GBA3Q9H227 469 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 PABPC3Q9H361 631 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 L2HGDHQ9H9P8 463 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 EBF2Q9HAK2 575 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 USP36Q9P275 1121 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 KLHL8Q9P2G9 620 aaPredicted RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 SUN2Q9UH99 717 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 RSPH14Q9UHP6 348 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 ZFR2Q9UPR6 939 aaKnown RBP6.54□□□□□ -1.36
CD44-214ENST00000525211 KCTD3Q9Y597 815 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 SPO11Q9Y5K1 396 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 RAI2Q9Y5P3 530 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 GPR179Q6PRD1 2367 aa6.54□□□□□ -1.36
CD44-214ENST00000525211 GON4LQ3T8J9 2241 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ANKRD36A6QL64 1941 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 MYLKQ15746 1914 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TSPAN11A1L157 253 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 NPIPB15A6NHN6 443 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 PRR33A8MZF0 331 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 KPNA3O00505 521 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 BUD23O43709 281 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 SYNCRIPO60506 623 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 PGLSO95336 258 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 PAPSS2O95340 614 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 APBB3O95704 486 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 IGSF6O95976 241 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TPH1P17752 444 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 LHCGRP22888 699 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 PLA2G5P39877 138 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 NNMTP40261 264 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 RPL21P46778 160 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 RPIAP49247 311 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TPMTP51580 245 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TCF15Q12870 199 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 RALGDSQ12967 914 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ELAVL3Q14576 367 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 ANGPT1Q15389 498 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 WHAMMP3Q1A5X7 153 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 HSF5Q4G112 596 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 PREPLQ4J6C6 727 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 ZNF805Q5CZA5 627 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 SIRPB2Q5JXA9 342 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 SEL1L3Q68CR1 1132 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ZNF776Q68DI1 518 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 SLC41A1Q8IVJ1 513 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TMIEQ8NEW7 156 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 LPCAT1Q8NF37 534 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 TSTD1Q8NFU3 115 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 IPMKQ8NFU5 416 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 PDCD6IPQ8WUM4 868 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 NELL1Q92832 810 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 FAM131CQ96AQ9 280 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 SIPA1Q96FS4 1042 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ORAI3Q9BRQ5 295 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 WDR83Q9BRX9 315 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 TDRD1Q9BXT4 1180 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 CPEB1Q9BZB8 566 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 TRIM31Q9BZY9 425 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 POLR1EQ9GZS1 481 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 SUV39H2Q9H5I1 410 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 C6orf106Q9H6K1 298 aaPredicted RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 ITM2CQ9NQX7 267 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 RAB6BQ9NRW1 208 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 FBXL12Q9NXK8 326 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 DONSONQ9NYP3 566 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 PCYOX1Q9UHG3 505 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 DMGDHQ9UI17 866 aaKnown RBP6.53□□□□□ -1.36
CD44-214ENST00000525211 CYP8B1Q9UNU6 501 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 SLC8A2Q9UPR5 921 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 CA5BQ9Y2D0 317 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 COQ6Q9Y2Z9 468 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 FADS3Q9Y5Q0 445 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 R4GN57 208 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
CD44-214ENST00000525211 CXorf51AA0A1B0GTR3 108 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 LOC285095A0A1B0GVY8 99 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 ESYT3A0FGR9 886 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 CCDC78A2IDD5 438 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 PRR23AA6NEV1 266 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 H0Y858 1186 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 CCL22O00626 93 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 AREL1O15033 823 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 NPC1O15118 1278 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 AXIN1O15169 862 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 RAD51BO15315 384 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 LAMTOR5O43504 91 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 LZTS3O60299 673 aaPredicted RBP6.52□□□□□ -1.37
CD44-214ENST00000525211 OPHN1O60890 802 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 AVILO75366 819 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 RNASEH2AO75792 299 aaKnown RBP6.52□□□□□ -1.37
CD44-214ENST00000525211 F7P08709 466 aaPredicted RBP6.52□□□□□ -1.37
CD44-214ENST00000525211 C1SP09871 688 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 ADRB3P13945 408 aa6.52□□□□□ -1.37
CD44-214ENST00000525211 STIP1P31948 543 aaKnown RBP6.52□□□□□ -1.37
CD44-214ENST00000525211 HNF1BP35680 557 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms