RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 COL6A6A6NMZ7 2263 aa15.56■□□□□ 0.08
MRPS28-209ENST00000522987 ZFC3H1O60293 1989 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 TTC24A2A3L6 582 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 HK3P52790 923 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 GSCP56915 257 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 YBEYP58557 167 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 VAC14Q08AM6 782 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 ELP6Q0PNE2 266 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 UGP2Q16851 508 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 PARP15Q460N3 678 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 INO80DQ53TQ3 878 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 ARHGAP36Q6ZRI8 547 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 JAMLQ86YT9 394 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 Q8N9G6 341 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 TSEN2Q8NCE0 465 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 WDR36Q8NI36 951 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 CASKIN2Q8WXE0 1202 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 NAT6Q93015 286 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 PDXPQ96GD0 296 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 CNPY3Q9BT09 278 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 CPEB1Q9BZB8 566 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 EDEM3Q9BZQ6 932 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 SLC39A8Q9C0K1 460 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 DHX35Q9H5Z1 703 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 RETREG1Q9H6L5 497 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 PDFQ9HBH1 243 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 MRPL40Q9NQ50 206 aaKnown RBP15.55■□□□□ 0.08
MRPS28-209ENST00000522987 KLQ9UEF7 1012 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 MOSPD1Q9UJG1 213 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 AP4E1Q9UPM8 1137 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 MFHAS1Q9Y4C4 1052 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 ZNF462Q96JM2 2506 aa15.55■□□□□ 0.08
MRPS28-209ENST00000522987 CCDC187A0A096LP49 1063 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 CXorf51AA0A1B0GTR3 108 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 LGALS16A8MUM7 142 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 ERVH48-1M5A8F1 160 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 DFFAO00273 331 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 RIOK3O14730 519 aaKnown RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 RASGRP1O95267 797 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 RPLP0P05388 317 aaKnown RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 SRP54P61011 504 aaKnown RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 SRSF6Q13247 344 aaKnown RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 NFATC4Q14934 902 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 ELOCQ15369 112 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 MCOLN2Q8IZK6 566 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 UMODL1-AS1Q8N2C9 162 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 TPCN2Q8NHX9 752 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 OR1E3Q8WZA6 343 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 GFM1Q96RP9 751 aaKnown RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 PEBP4Q96S96 227 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 LRRC19Q9H756 370 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 ATXN7L1Q9ULK2 861 aaPredicted RBP15.54■□□□□ 0.08
MRPS28-209ENST00000522987 CFAP46Q8IYW2 2715 aa15.54■□□□□ 0.08
MRPS28-209ENST00000522987 A0A1W2PQM1 296 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 WASH4PA8MWX3 477 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 CDRT15L2A8MXV6 281 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 EEF2KO00418 725 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 TCEA3O75764 348 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 PSMA2P25787 234 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 MMP12P39900 470 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 UCNP55089 124 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 TGIF1Q15583 401 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 CT47A1Q5JQC4 288 aaPredicted RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 ACAD10Q6JQN1 1059 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 ERAP2Q6P179 960 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 SRLQ86TD4 932 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 TP53INP2Q8IXH6 220 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 PELI3Q8N2H9 469 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 FSTL5Q8N475 847 aaPredicted RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 ARL14Q8N4G2 192 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 ARL10Q8N8L6 244 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 SCG3Q8WXD2 468 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 FUBP1Q96AE4 644 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 WDR92Q96MX6 357 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 KCTD15Q96SI1 283 aaPredicted RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 SNRNP25Q9BV90 132 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 DPH1Q9BZG8 443 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 TRIM7Q9C029 511 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 LIMA1Q9UHB6 759 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 ATP8A1Q9Y2Q0 1164 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 PCDHGA8Q9Y5G5 932 aa15.53■□□□□ 0.08
MRPS28-209ENST00000522987 SETXQ7Z333 2677 aaKnown RBP15.53■□□□□ 0.08
MRPS28-209ENST00000522987 TMEM202A6NGA9 273 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 B4DGG1 531 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 NTN3O00634 580 aaPredicted RBP15.52■□□□□ 0.08
MRPS28-209ENST00000522987 FGF10O15520 208 aaPredicted RBP15.52■□□□□ 0.08
MRPS28-209ENST00000522987 DAPK3O43293 454 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 PALMO75781 387 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 TNFP01375 233 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 ALPIP09923 528 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 TNFAIP3P21580 790 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 HTR1BP28222 390 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 BLKP51451 505 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 RHDQ02161 417 aa15.52■□□□□ 0.08
MRPS28-209ENST00000522987 RALGDSQ12967 914 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms