RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SLC25A41Q8N5S1 370 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 DNAAF3Q8N9W5 541 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 OR52K1Q8NGK4 314 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 FBXO25Q8TCJ0 367 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 ARRDC3Q96B67 414 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 SIPA1Q96FS4 1042 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 MRGPRX1Q96LB2 322 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 SERPINB12Q96P63 405 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 HDAC8Q9BY41 377 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 FOXP3Q9BZS1 431 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 ZDHHC18Q9NUE0 388 aa25.83■■□□□ 1.73
NKX2-1-204ENST00000522719 ALDH1A2O94788 518 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 TUBBP07437 444 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 MCM3P25205 808 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 GRIA1P42261 906 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 GALNT3Q14435 633 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 HLTFQ14527 1009 aaKnown RBP eCLIP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 UGP2Q16851 508 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 ZNF534Q76KX8 674 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 CAND1Q86VP6 1230 aaKnown RBP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 ZSWIM9Q86XI8 627 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 ZCCHC9Q8N567 271 aaKnown RBP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 TSTD1Q8NFU3 115 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 SRPK1Q96SB4 655 aaKnown RBP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 EPC1Q9H2F5 836 aa25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 PABPC3Q9H361 631 aaKnown RBP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 POLR3BQ9NW08 1133 aaPredicted RBP25.82■■□□□ 1.72
NKX2-1-204ENST00000522719 A0A0J9YYE9 177 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 UPK3BL1B0FP48 263 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 UPK3BL2E5RIL1 263 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 GOLGA8MH3BSY2 632 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 MID1O15344 667 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 PI15O43692 258 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 PPFIA2O75334 1257 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 TRBC1P01850 177 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 GABRG2P18507 467 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 CHRNA4P43681 627 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 CARSP49589 748 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 QPCTQ16769 361 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 TTC31Q49AM3 519 aaPredicted RBP25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 ERN2Q76MJ5 926 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 PARS2Q7L3T8 475 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 PDIK1LQ8N165 341 aa25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 MTRF1LQ9UGC7 380 aaKnown RBP25.81■■□□□ 1.72
NKX2-1-204ENST00000522719 TIMP2P16035 220 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 NDUFV2P19404 249 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 XPAP23025 273 aaPredicted RBP25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 MAGEA3P43357 314 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 NPY2RP49146 381 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 CCR3P51677 355 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 NEK3P51956 506 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 ARL4CP56559 192 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 CBLBQ13191 982 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 POM121L1PQ3SYA9 428 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 WDR93Q6P2C0 686 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 FBXL19Q6PCT2 694 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 TTC7BQ86TV6 843 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 CAMKK1Q8N5S9 505 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 MYRIPQ8NFW9 859 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 RAB7BQ96AH8 199 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 SCRN2Q96FV2 425 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 PHACTR1Q9C0D0 580 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 TSPYL1Q9H0U9 437 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 C2orf42Q9NWW7 574 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 BFARQ9NZS9 450 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 DLL1O00548 723 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 PAPSS2O95340 614 aaPredicted RBP25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 ACADMP11310 421 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 DRD3P35462 400 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 CXCL12P48061 93 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 METAP1P53582 386 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 HIF1AQ16665 826 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 ARMC3Q5W041 872 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 USP30Q70CQ3 517 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 USP45Q70EL2 814 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 BMP8AQ7Z5Y6 402 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 AADATQ8N5Z0 425 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 HMGB4Q8WW32 186 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 MCCC1Q96RQ3 725 aaPredicted RBP25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 LYSMD1Q96S90 227 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 MAGEE1Q9HCI5 957 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 HACD3Q9P035 362 aa25.8■■□□□ 1.72
NKX2-1-204ENST00000522719 MYLKQ15746 1914 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 VCANP13611 3396 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 CTIFO43310 598 aaKnown RBP25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 APBB3O95704 486 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 ADRB3P13945 408 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 ECHS1P30084 290 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 CNTN1Q12860 1018 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 DNAJC21Q5F1R6 531 aaKnown RBP25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 CEP128Q6ZU80 1094 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 KBTBD6Q86V97 674 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 HDDC3Q8N4P3 179 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 PBXIP1Q96AQ6 731 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 FAM131CQ96AQ9 280 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 OMDQ99983 421 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 NFU1Q9UMS0 254 aa25.79■■□□□ 1.72
NKX2-1-204ENST00000522719 CAPN8A6NHC0 703 aa25.78■■□□□ 1.72
NKX2-1-204ENST00000522719 P2RY2P41231 377 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms