RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TRIB3Q96RU7 358 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 NOD2Q9HC29 1040 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 PCDH12Q9NPG4 1184 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.88
CLK4-209ENST00000521621 CSNK1G3Q9Y6M4 447 aa9.52□□□□□ -0.88
CLK4-209ENST00000521621 CST8O60676 142 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CCT8P50990 548 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 KIAA1024LP59773 190 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 PTK2BQ14289 1009 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 FGL2Q14314 439 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 STAT4Q14765 748 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 ARMC12Q5T9G4 340 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 MEI1Q5TIA1 1274 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 TTC7BQ86TV6 843 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 ZSWIM9Q86XI8 627 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CACTIN-AS1Q8N1I8 211 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 TRIM58Q8NG06 486 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 FCRL5Q96RD9 977 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 OSBPL8Q9BZF1 889 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CDH19Q9H159 772 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CARD9Q9H257 536 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 GDF3Q9NR23 364 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 RAD18Q9NS91 495 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 KCND1Q9NSA2 647 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 LRP4O75096 1905 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 ATXN2Q99700 1313 aaKnown RBP9.52□□□□□ -0.89
CLK4-209ENST00000521621 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.52□□□□□ -0.89
CLK4-209ENST00000521621 FPGTO14772 594 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CBFA2T3O75081 653 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 PIGNO95427 931 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CFIP05156 583 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 HLA-DQB2P05538 268 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 SCNN1BP51168 640 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 TRAF2Q12933 501 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 KIF19Q2TAC6 998 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 HLA-BQ31612 363 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 LEKR1Q6ZMV7 388 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CAMK1DQ8IU85 385 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 CDKL3Q8IVW4 592 aaPredicted RBP9.52□□□□□ -0.89
CLK4-209ENST00000521621 CNTD1Q8N815 330 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 HAUS1Q96CS2 278 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 RTP4Q96DX8 246 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 KLHDC7BQ96G42 594 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 ELF4Q99607 663 aaPredicted RBP9.52□□□□□ -0.89
CLK4-209ENST00000521621 FERMT1Q9BQL6 677 aa9.52□□□□□ -0.89
CLK4-209ENST00000521621 FEZ2Q9UHY8 353 aaPredicted RBP9.52□□□□□ -0.89
CLK4-209ENST00000521621 LRRK1Q38SD2 2015 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 CAPN8A6NHC0 703 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 PLK4O00444 970 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 GKP32189 559 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 GJC1P36383 396 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TRIM23P36406 574 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 MARCKSL1P49006 195 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 WASHC5Q12768 1159 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SGCGQ13326 291 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SHBQ15464 509 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 CDKN3Q16667 212 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ARMC3Q5W041 872 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TCEAL6Q6IPX3 200 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ESRP1Q6NXG1 681 aaKnown RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 DRICH1Q6PGQ1 229 aaPredicted RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 LIPIQ6XZB0 460 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 USP45Q70EL2 814 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SPATS2Q86XZ4 545 aaKnown RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 DEFB119Q8N690 84 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ALG3Q92685 438 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TCEAL3Q969E4 200 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 BMFQ96LC9 184 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SEMA3CQ99985 751 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SLC32A1Q9H598 525 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TFR2Q9UP52 801 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 RAI2Q9Y5P3 530 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SNX11Q9Y5W9 270 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 A0A1B0GVT2 93 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 FAM221BA6H8Z2 402 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 CES2O00748 559 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TNFRSF10CO14798 259 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 BNIP3LO60238 219 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 PRLP01236 227 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 TRBC1P01850 177 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 GM2AP17900 193 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 XPAP23025 273 aaPredicted RBP9.51□□□□□ -0.89
CLK4-209ENST00000521621 PTPN3P26045 913 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 NIPAL4Q0D2K0 466 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ZBTB17Q13105 803 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 SEL1L3Q68CR1 1132 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 CACUL1Q86Y37 369 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 BTN2A2Q8WVV5 523 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ALS2CR12Q96Q35 445 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 LGMNQ99538 433 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 CDC6Q99741 560 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 ADGRE3Q9BY15 652 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 GLOD4Q9HC38 313 aa9.51□□□□□ -0.89
CLK4-209ENST00000521621 NT5MQ9NPB1 228 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms