RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 HDDC3Q8N4P3 179 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PDCD7Q8N8D1 485 aaKnown RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 NAT8LQ8N9F0 302 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 NOA1Q8NC60 698 aaKnown RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 IPMKQ8NFU5 416 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 HMGB4Q8WW32 186 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PIH1D2Q8WWB5 315 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLN8-203ENST00000518780 CPT1BQ92523 772 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 RMDN1Q96DB5 314 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 MCCC1Q96RQ3 725 aaPredicted RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 PRRX2Q99811 253 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 TBL1YQ9BQ87 522 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 GORASP1Q9BQQ3 440 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 PCED1AQ9H1Q7 454 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 MAGEE1Q9HCI5 957 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 FAM114A2Q9NRY5 505 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 FBXL12Q9NXK8 326 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 KCTD5Q9NXV2 234 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 UBP1Q9NZI7 540 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 USP36Q9P275 1121 aaKnown RBP9.54□□□□□ -0.88
CLN8-203ENST00000518780 BCCIPQ9P287 314 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLN8-203ENST00000518780 CHKBQ9Y259 395 aa9.54□□□□□ -0.88
CLN8-203ENST00000518780 TECTAO75443 2155 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 A0A0J9YYE9 177 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 TTC24A2A3L6 582 aaPredicted RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 RGSL1A5PLK6 1076 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 PSMD11O00231 422 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 RIOK3O14730 519 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 AREL1O15033 823 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 AXIN1O15169 862 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PPFIA2O75334 1257 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 RNASEH2AO75792 299 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 SEC31AO94979 1220 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 HEXIM1O94992 359 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 PIGNO95427 931 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 TRBC1P01850 177 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ATXN1LP0C7T5 689 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 ADRB3P13945 408 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ZNF30P17039 623 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 GKP32189 559 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 CNR2P34972 360 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 DRD3P35462 400 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 NUDT1P36639 197 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 P2RY2P41231 377 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 VPS41P49754 854 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 TPMTP51580 245 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 CUL1Q13616 776 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 IHHQ14623 411 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 QPCTQ16769 361 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 USP39Q53GS9 565 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 TMEM31Q5JXX7 168 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 IZUMO3Q5VZ72 239 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ANO7Q6IWH7 933 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 HIBCHQ6NVY1 386 aaPredicted RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 KIAA1324Q6UXG2 1013 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 SLC36A4Q6YBV0 504 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PARS2Q7L3T8 475 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLN8-203ENST00000518780 TMEM105Q8N8V8 129 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 GANCQ8TET4 914 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PDCD6IPQ8WUM4 868 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 PTCD2Q8WV60 388 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 UBXN4Q92575 508 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PEX13Q92968 403 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ARRDC3Q96B67 414 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 NSMCE3Q96MG7 304 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 BTBD1Q9H0C5 482 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 CDH19Q9H159 772 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 PREBQ9HCU5 417 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 CASS4Q9NQ75 786 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 RAD18Q9NS91 495 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 BFARQ9NZS9 450 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 ANAPC5Q9UJX4 755 aa9.53□□□□□ -0.88
CLN8-203ENST00000518780 NYNRINQ9P2P1 1898 aaKnown RBP9.53□□□□□ -0.88
CLN8-203ENST00000518780 MUC22E2RYF6 1773 aaPredicted RBP9.52□□□□□ -0.88
CLN8-203ENST00000518780 CAPN8A6NHC0 703 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 LRRC72A6NJI9 287 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
CLN8-203ENST00000518780 PLRG1O43660 514 aaKnown RBP9.52□□□□□ -0.89
CLN8-203ENST00000518780 GJB3O75712 270 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 AGTP01019 485 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 PDHA1P08559 390 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 MCM3P25205 808 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 RPL21P46778 160 aaKnown RBP9.52□□□□□ -0.89
CLN8-203ENST00000518780 CNTN1Q12860 1018 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 PCSK7Q16549 785 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 MAP7D1Q3KQU3 841 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 TMEM52BQ4KMG9 183 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 DNAJC21Q5F1R6 531 aaKnown RBP9.52□□□□□ -0.89
CLN8-203ENST00000518780 SIRPB2Q5JXA9 342 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 SPDYCQ5MJ68 293 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 PIP5KL1Q5T9C9 394 aa9.52□□□□□ -0.89
CLN8-203ENST00000518780 FAXCQ5TGI0 409 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms