RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 VPS45Q9NRW7 570 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 FBXL12Q9NXK8 326 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 WSB2Q9NYS7 404 aaPredicted RBP9.95□□□□□ -0.82
CLN8-202ENST00000517514 GRHL1Q9NZI5 618 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 DMGDHQ9UI17 866 aaKnown RBP9.95□□□□□ -0.82
CLN8-202ENST00000517514 FBXO4Q9UKT5 387 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 INVSQ9Y283 1065 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 SPO11Q9Y5K1 396 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 FADS3Q9Y5Q0 445 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 TRPM6Q9BX84 2022 aa9.95□□□□□ -0.82
CLN8-202ENST00000517514 WDR87Q6ZQQ6 2873 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 A0A0J9YYE9 177 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CTAGE15A4D2H0 777 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 FAM187AA6NFU0 413 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 NPIPB15A6NHN6 443 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 UPK3BL1B0FP48 263 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ANKRD66B4E2M5 251 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 UPK3BL2E5RIL1 263 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 DLL1O00548 723 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 DNALI1O14645 258 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 AXIN1O15169 862 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 GALR2O43603 387 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 PLRG1O43660 514 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 RNASEH1O60930 286 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 RNASEH2AO75792 299 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 ALDH1A2O94788 518 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 NDST3O95803 873 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 GAS8O95995 478 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 EPOP01588 193 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TRBC1P01850 177 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 DNTTP04053 509 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ALPIP09923 528 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 PIRTP0C851 137 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CTAGE8P0CG41 777 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CTPS1P17812 591 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TPSB2P20231 275 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 LHCGRP22888 699 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 HNF1BP35680 557 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 MMP12P39900 470 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 NEK3P51956 506 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TERF1P54274 439 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ADPRHP54922 357 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ANGPT1Q15389 498 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 PPP1R7Q15435 360 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TPSAB1Q15661 275 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 SLC1A5Q15758 541 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 UGP2Q16851 508 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ARMC12Q5T9G4 340 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 FAM46CQ5VWP2 391 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 BRAT1Q6PJG6 821 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 RFLNAQ6ZTI6 216 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 SYDE1Q6ZW31 735 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 MICALCLQ6ZW33 695 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 USP30Q70CQ3 517 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TSPAN33Q86UF1 283 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CTAGE6Q86UF2 777 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 FAM124AQ86V42 546 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CAND1Q86VP6 1230 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 CTAGE4Q8IX94 777 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CEP112Q8N8E3 955 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 LPCAT1Q8NF37 534 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 PDCD6IPQ8WUM4 868 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 SEC14L1Q92503 715 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 TBL1YQ9BQ87 522 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CASS4Q9NQ75 786 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 EIF2B3Q9NR50 452 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 PIH1D1Q9NWS0 290 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 BCCIPQ9P287 314 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLN8-202ENST00000517514 B4GALT6Q9UBX8 382 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 FZD4Q9ULV1 537 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 PHTF1Q9UMS5 762 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 CYP8B1Q9UNU6 501 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ZFR2Q9UPR6 939 aaKnown RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 SNX24Q9Y343 169 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
CLN8-202ENST00000517514 MYO15AQ9UKN7 3530 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 SPAG17Q6Q759 2223 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 PLXNB3Q9ULL4 1909 aa9.94□□□□□ -0.82
CLN8-202ENST00000517514 AURKAO14965 403 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 HRO43593 1189 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 AP1G1O43747 822 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 SEC31AO94979 1220 aaKnown RBP9.93□□□□□ -0.82
CLN8-202ENST00000517514 APRTP07741 180 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 RPL26P61254 145 aaKnown RBP9.93□□□□□ -0.82
CLN8-202ENST00000517514 PPP2CBP62714 309 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 PPP2CAP67775 309 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 BASP1P80723 227 aaKnown RBP9.93□□□□□ -0.82
CLN8-202ENST00000517514 FGL2Q14314 439 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 PRPSAP1Q14558 356 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 TMEM52BQ4KMG9 183 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 DNTTIP2Q5QJE6 756 aaKnown RBP9.93□□□□□ -0.82
CLN8-202ENST00000517514 IZUMO3Q5VZ72 239 aa9.93□□□□□ -0.82
CLN8-202ENST00000517514 HIBCHQ6NVY1 386 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms