RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 VOPP1Q96AW1 172 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ISG20Q96AZ6 181 aaKnown RBP5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OTUB2Q96DC9 234 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C19orf43Q9BQ61 176 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FAM167BQ9BTA0 163 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C2orf49Q9BVC5 232 aaPredicted RBP5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C1QTNF1Q9BXJ1 281 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TDRD1Q9BXT4 1180 aaKnown RBP5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LMAN2LQ9H0V9 348 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LINC00597Q9H2U6 94 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SLCO1B3Q9NPD5 702 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SNX15Q9NRS6 342 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ABCB8Q9NUT2 735 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PCMTD2Q9NV79 361 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PLK2Q9NYY3 685 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TBC1D14Q9P2M4 693 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GGT7Q9UJ14 662 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 VPS28Q9UK41 221 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FBXO10Q9UK96 956 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PHTF1Q9UMS5 762 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 KCTD3Q9Y597 815 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PCDHGC4Q9Y5F7 938 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SPO11Q9Y5K1 396 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RAI2Q9Y5P3 530 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HCFC2Q9Y5Z7 792 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ARL5AQ9Y689 179 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PLXNB3Q9ULL4 1909 aa5.46□□□□□ -1.54
SCARNA20.4-201ENST00000516969 C5orf42Q9H799 3197 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 A0A096LPK6 155 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCDC162PA2VCL2 907 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 WDR91A4D1P6 747 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCT8L1PA6NM43 557 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 K7ERQ8 282 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRAFD1O14545 582 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 AURKAO14965 403 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HTRA2O43464 458 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 SNNO75324 88 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RPP40O75818 363 aaKnown RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CSPG5O95196 566 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PGLSO95336 258 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 WISP3O95389 354 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TGDSO95455 350 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PRAMEF12O95522 483 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CRTAMO95727 393 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TOP3BO95985 862 aaKnown RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CYBBP04839 570 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 F7P08709 466 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CEBPBP17676 345 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CRABP2P29373 138 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 HLA-FP30511 346 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PBX2P40425 430 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CD151P48509 253 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 VASPP50552 380 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RPL26P61254 145 aaKnown RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RHOAP61586 193 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 AP1S1P61966 158 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MPP1Q00013 466 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 POU4F1Q01851 419 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRAF2Q12933 501 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 IFT88Q13099 833 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GALNT3Q14435 633 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DMC1Q14565 340 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PTPRCAPQ14761 206 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DLG2Q15700 870 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCDC153Q494R4 210 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF789Q5FWF6 425 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PITRM1Q5JRX3 1037 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DGKKQ5KSL6 1271 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF697Q5TEC3 545 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ZNF470Q6ECI4 717 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ASTLQ6HA08 431 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CNSTQ6PJW8 725 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 FAM47EQ6ZV65 393 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MICALCLQ6ZW33 695 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 OTOAQ7RTW8 1153 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GRASPQ7Z6J2 395 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CMC1Q7Z7K0 106 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RBM23Q86U06 439 aaKnown RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 LCA5Q86VQ0 697 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 RNF135Q8IUD6 432 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ARID3BQ8IVW6 561 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CEP97Q8IW35 865 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TRIM42Q8IWZ5 723 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PLPP6Q8IY26 295 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TMEM151AQ8N4L1 468 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 TTC30BQ8N4P2 665 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CELF5Q8N6W0 485 aaKnown RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCDC63Q8NA47 563 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ARMC2Q8NEN0 867 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 MDGA1Q8NFP4 955 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 VN1R2Q8NFZ6 395 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 GABPB2Q8TAK5 448 aaPredicted RBP5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 ITFG1Q8TB96 612 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BLOC1S5Q8TDH9 187 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 PIH1D2Q8WWB5 315 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CCT6BQ92526 530 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 BHMTQ93088 406 aa5.45□□□□□ -1.54
SCARNA20.4-201ENST00000516969 CDKN2AIPNLQ96HQ2 116 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms