RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 ADRA1BP35368 520 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GP5P40197 560 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CLCNKBP51801 687 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MRPS5P82675 430 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HOXA4Q00056 320 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ECT2LQ008S8 904 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PGM5Q15124 567 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NAB2Q15742 525 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM153CQ494X1 144 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CRY2Q49AN0 593 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CDONQ4KMG0 1287 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LY6G5CQ5SRR4 150 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM63BQ5T3F8 832 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LRIF1Q5T3J3 769 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TSTD2Q5T7W7 516 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CAVIN1Q6NZI2 390 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RBM44Q6ZP01 1051 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LCNL1Q6ZST4 164 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC91Q7Z6B0 441 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLC35F3Q8IY50 421 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM185AQ8N0U4 392 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ARL10Q8N8L6 244 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ARL14EPQ8N8R7 260 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM47BQ8NA70 645 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MSANTD4Q8NCY6 345 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 OR14L1PQ8NHC6 308 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KIF18AQ8NI77 898 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HDAC7Q8WUI4 952 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CACTINQ8WUQ7 758 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF622Q969S3 477 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SNX21Q969T3 373 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTERQ96BW5 349 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC34Q96HJ3 373 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C8orf49Q96NF6 230 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CITED2Q99967 270 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MXRA8Q9BRK3 442 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 THUMPD3Q9BV44 507 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MRPL9Q9BYD2 267 aaKnown RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C2orf40Q9H1Z8 148 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 OSGEPL1Q9H4B0 414 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ACTR5Q9H9F9 607 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLC28A3Q9HAS3 691 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MTRRQ9UBK8 725 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLEKHB1Q9UF11 243 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CMAHPQ9Y471 501 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MAU2Q9Y6X3 613 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MST1RQ04912 1400 aa3.36□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C1orf226A1L170 272 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BTBD19C9JJ37 291 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PI4K2BG5E9Z4 385 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 H7C1Q1 480 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLRG1O43660 514 aaKnown RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NEURL1O76050 574 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMCC1O94876 653 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FTCDO95954 541 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BCL10O95999 233 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PCNAP12004 261 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FDPSP14324 419 aaKnown RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ATP6V1B1P15313 513 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SRD5A1P18405 259 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ANXA7P20073 488 aaKnown RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TACR3P29371 465 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HOXA7P31268 230 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MCM7P33993 719 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PLA2G5P39877 138 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MPLP40238 635 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCR10P46092 362 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CXCR3P49682 368 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NPY4RP50391 375 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 YPEL5P62699 121 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 BLOC1S1P78537 153 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SORDQ00796 357 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FOXI1Q12951 378 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KCNC3Q14003 757 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PTPAQ15257 358 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 E2F5Q15329 346 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DLG2Q15700 870 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TCTN1Q2MV58 587 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C15orf59Q2T9L4 293 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PCGF3Q3KNV8 242 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MMEL1Q495T6 779 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FBLN7Q53RD9 439 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HMBOX1Q6NT76 420 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CEP85Q6P2H3 762 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RNF207Q6ZRF8 634 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CYB5R4Q7L1T6 521 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GLRX5Q86SX6 157 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 METTL23Q86XA0 190 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CEP57L1Q8IYX8 460 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NUP93Q8N1F7 819 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NAT8LQ8N9F0 302 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TC2NQ8N9U0 490 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GJC3Q8NFK1 279 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CMASQ8NFW8 434 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HUS1BQ8NHY5 278 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GDAP1Q8TB36 358 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PIGOQ8TEQ8 1089 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DEPDC1BQ8WUY9 529 aa3.35□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NSMCE1Q8WV22 266 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms