RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TF	P02787	698 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RB1	P06400	928 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CBSL	P0DN79	551 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SNHG28	P0DPA3	235 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CTSA	P10619	480 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	VDR	P11473	427 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SLC2A4	P14672	509 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CD72	P21854	359 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EEF1D	P29692	281 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CBS	P35520	551 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PTPN9	P43378	593 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ME1	P48163	572 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PIP4K2A	P48426	406 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CENPA	P49450	140 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GNAQ	P50148	359 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	EFNA5	P52803	228 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FOXG1	P55316	489 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KRT83	P78385	493 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CFHR1	Q03591	330 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	LRMP	Q12912	555 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FRG1	Q14331	258 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	VEPH1	Q14D04	833 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RBMS2	Q15434	407 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TMEM266	Q2M3C6	531 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ARL13A	Q5H913	290 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TBC1D9B	Q66K14	1250 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CPLX2	Q6PUV4	134 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GLDN	Q6ZMI3	551 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PIM3	Q86V86	326 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	WDR5B	Q86VZ2	330 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TMC8	Q8IU68	726 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TEX11	Q8IYF3	940 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	POC5	Q8NA72	575 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GDPD5	Q8WTR4	605 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PRPF31	Q8WWY3	499 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CLMN	Q96JQ2	1002 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZFYVE19	Q96K21	471 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FCRL5	Q96RD9	977 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HEMGN	Q9BXL5	484 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	OR10A4	Q9H209	315 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PLEKHA4	Q9H4M7	779 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RABEP2	Q9H5N1	569 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	POLR1B	Q9H9Y6	1135 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PDE7B	Q9NP56	450 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ABI3	Q9P2A4	366 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NLK	Q9UBE8	527 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IPO11	Q9UI26	975 aa	Known RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZHX1	Q9UKY1	873 aa	Predicted RBP	3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MKLN1	Q9UL63	735 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CARD8	Q9Y2G2	431 aa		3.57	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TOP2A	P11388	1531 aa	Known RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ADGRF5	Q8IZF2	1346 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	LY6G6E	A0A0G2JKS1	128 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	FAM157A	C9JC47	383 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	RNMT	O43148	476 aa	Known RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TLR2	O60603	784 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ENTPD3	O75355	529 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MT-CYB	P00156	380 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CLTB	P09497	229 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PCNA	P12004	261 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TMEM11	P17152	192 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GABRB1	P18505	474 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TFEB	P19484	476 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	DPP6	P42658	865 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HSD17B4	P51659	736 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	CLCNKB	P51801	687 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MRPL12	P52815	198 aa	Known RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TFAP4	Q01664	338 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PRPF4B	Q13523	1007 aa	Known RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	STIM1	Q13586	685 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GALNT3	Q14435	633 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PCLAF	Q15004	111 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KYNU	Q16719	465 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	KRT24	Q2M2I5	525 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	C15orf59	Q2T9L4	293 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SOWAHC	Q53LP3	525 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TCP11X2	Q5H9J9	407 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	C1QTNF12	Q5T7M4	302 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GKAP1	Q5VSY0	366 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	AWAT2	Q6E213	333 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	NCAPH2	Q6IBW4	605 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TSSK4	Q6SA08	328 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	LRIG3	Q6UXM1	1119 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZNF517	Q6ZMY9	492 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MOB3C	Q70IA8	216 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TECPR1	Q7Z6L1	1165 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	TFAP2D	Q7Z6R9	452 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	GPAT4	Q86UL3	456 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IGFN1	Q86VF2	1251 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	HACE1	Q8IYU2	909 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SCML4	Q8N228	414 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	SYT2	Q8N9I0	419 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	POMGNT2	Q8NAT1	580 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	IP6K1	Q92551	441 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	PIGK	Q92643	395 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	ZBTB9	Q96C00	473 aa		3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	MMAB	Q96EY8	250 aa	Predicted RBP	3.56	□□□□□ -1.84
CALCOCO2-223	ENST00000514267	VCPIP1	Q96JH7	1222 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms