RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.71□□□□□ -0.85
VCAN-210ENST00000513960 ANGPT2O15123 496 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 NDUFB5O43674 189 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 DDHD2O94830 711 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 SMIM10L2AP0DMW4 78 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 SMIM10L2BP0DMW5 78 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 NCAM1P13591 858 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 FASP25445 335 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 AXLP30530 894 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 ADIGQ0VDE8 80 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 SEMA5AQ13591 1074 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 GRM3Q14832 879 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 CYP51A1Q16850 503 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 LIPMQ5VYY2 423 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 REP15Q6BDI9 236 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 ZNF534Q76KX8 674 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 PIGZQ86VD9 579 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 TMEM102Q8N9M5 508 aaPredicted RBP9.71□□□□□ -0.85
VCAN-210ENST00000513960 ACVR1CQ8NER5 493 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 CAPSLQ8WWF8 208 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 RSPH1Q8WYR4 309 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 POMKQ9H5K3 350 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 NOL6Q9H6R4 1146 aaKnown RBP9.71□□□□□ -0.85
VCAN-210ENST00000513960 SPC25Q9HBM1 224 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 OLAHQ9NV23 265 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 SMOXQ9NWM0 555 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 MOCS1Q9NZB8 636 aa9.71□□□□□ -0.85
VCAN-210ENST00000513960 GPC6Q9Y625 555 aaPredicted RBP9.71□□□□□ -0.85
VCAN-210ENST00000513960 SMIM35A0A1B0GVV1 85 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 TMEM114B3SHH9 223 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 GPR32O75388 356 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 ALBP02768 609 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 ALDH4A1P30038 563 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 NCBP2-AS2Q69YL0 99 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 P2RY11Q96G91 374 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 BIRC8Q96P09 236 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 KATNBL1Q9H079 304 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 GOLGA2P5Q9HBQ8 144 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 TMPRSS4Q9NRS4 437 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 PAPPA2Q9BXP8 1791 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 H3BMQ9 156 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 PIRO00625 290 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 EI24O14681 340 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 MFSD11O43934 449 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 SERPINB7O75635 380 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 GSRP00390 522 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 ZNF12P17014 697 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 BMXP51813 675 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 CTBP1Q13363 440 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 SLC25A52Q3SY17 297 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 BORAQ6PGQ7 559 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 RNF19BQ6ZMZ0 732 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 TIFABQ6ZNK6 161 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 PLEKHH3Q7Z736 793 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 RAVER1Q8IY67 606 aaKnown RBP9.71□□□□□ -0.86
VCAN-210ENST00000513960 NDRG1Q92597 394 aaKnown RBP9.71□□□□□ -0.86
VCAN-210ENST00000513960 ASB9Q96DX5 294 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 COG8Q96MW5 612 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 RBBP8Q99708 897 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 CHRAC1Q9NRG0 131 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
VCAN-210ENST00000513960 PTGES3LE9PB15 166 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 M0QYT0 321 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 KPNA4O00629 521 aaPredicted RBP9.7□□□□□ -0.86
VCAN-210ENST00000513960 ZNF195O14628 629 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 ADAM23O75077 832 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 OXSR1O95747 527 aaPredicted RBP9.7□□□□□ -0.86
VCAN-210ENST00000513960 C1QAP02745 245 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 ZNF24P17028 368 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 DNASE1L3Q13609 305 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 POLD3Q15054 466 aaPredicted RBP9.7□□□□□ -0.86
VCAN-210ENST00000513960 PPP1R3AQ16821 1122 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 IMPG1Q17R60 797 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 FAM83EQ2M2I3 478 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 HEATR4Q86WZ0 1026 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 RNF139Q8WU17 664 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 IRGQQ8WZA9 623 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 HERC2P3Q9BVR0 1158 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 TRIM15Q9C019 465 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 PRDM12Q9H4Q4 367 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 ZBTB26Q9HCK0 441 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 SLC38A7Q9NVC3 462 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 MORF4L1Q9UBU8 362 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 OAZ3Q9UMX2 235 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 DHRS12A0PJE2 317 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 PRORSD1PA6NEY8 169 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 TRPC5OSA6NMA1 111 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 B4GAT1O43505 415 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 TIMM44O43615 452 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 SUPT7LO94864 414 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 MPOP05164 745 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 NCK1P16333 377 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 GLDCP23378 1020 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 NUMBP49757 651 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 RHDQ02161 417 aa9.7□□□□□ -0.86
VCAN-210ENST00000513960 CBLBQ13191 982 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms