RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZFHX3Q15911 3703 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 B4E171 279 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GRAP2O75791 330 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 DDAH2O95865 285 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 PRKAR1AP10644 381 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 KRT5P13647 590 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TIMP2P16035 220 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GNLYP22749 145 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 ALDH4A1P30038 563 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 ETFBP38117 255 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TSPAN7P41732 249 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 SYKP43405 635 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GPR3P46089 330 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 LIMK2P53671 638 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 OR1D5P58170 312 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 ELP6Q0PNE2 266 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 NR1D2Q14995 579 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 AGERQ15109 404 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TMEM52BQ4KMG9 183 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 SPECC1LQ69YQ0 1117 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 C11orf57Q6ZUT1 292 aaPredicted RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 TICAM1Q8IUC6 712 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 NLGN4XQ8N0W4 816 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 NLGN4YQ8NFZ3 816 aaPredicted RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 KIAA1524Q8TCG1 905 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 VOPP1Q96AW1 172 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 WRAP53Q9BUR4 548 aaKnown RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 INTS2Q9H0H0 1204 aaKnown RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 ANLNQ9NQW6 1124 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 PIGVQ9NUD9 493 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 DKK3Q9UBP4 350 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 ZNF212Q9UDV6 495 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 KCTD3Q9Y597 815 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 RHPN2P1A8MT19 583 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 B4DGG1 531 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 MKRN2OSH3BPM6 223 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 I6L893 689 aaPredicted RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 TNFRSF10CO14798 259 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 THAP12O43422 761 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 DUX1O43812 170 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 SRGAP2O75044 1071 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 DAB1O75553 588 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 PRKCGP05129 697 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 TCN2P20062 427 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 KELP23276 732 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ELAVL4P26378 380 aaKnown RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 UQCRFS1P47985 274 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 COPB1P53618 953 aaKnown RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 ABHD18Q0P651 414 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 SQSTM1Q13501 440 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ARHGAP44Q17R89 818 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 SMYD4Q8IYR2 804 aaPredicted RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 WDTC1Q8N5D0 677 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 EHBP1Q8NDI1 1231 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 OR56A4Q8NGH8 313 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ARHGEF2Q92974 986 aaKnown RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 KREMEN1Q96MU8 473 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 NPY6RQ99463 290 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 NUDT22Q9BRQ3 303 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 SPRY4Q9C004 299 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ZYG11BQ9C0D3 744 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 TRIT1Q9H3H1 467 aaKnown RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
RNF4-216ENST00000511859 STAP1Q9ULZ2 295 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 OR1A2Q9Y585 309 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 ACTL7AQ9Y615 435 aa11.66□□□□□ -0.54
RNF4-216ENST00000511859 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
RNF4-216ENST00000511859 LOC101059948A0A1B0GTJ6 334 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 CACNB4O00305 520 aaPredicted RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 HOXC4P09017 264 aaPredicted RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 ITIH2P19823 946 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 XPAP23025 273 aaPredicted RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 CD1CP29017 333 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 OAS2P29728 719 aaKnown RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 GNA15P30679 374 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 MAN1A1P33908 653 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 PRCPP42785 496 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 SLC6A3Q01959 620 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 LRRC63Q05C16 580 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 MTM1Q13496 603 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 TSR1Q2NL82 804 aaKnown RBP11.65□□□□□ -0.55
RNF4-216ENST00000511859 LRRC73Q5JTD7 316 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 OLFML1Q6UWY5 402 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 FAM183BPQ6ZVS7 135 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 ASB18Q6ZVZ8 466 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 SLC26A9Q7LBE3 791 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 ARHGEF19Q8IW93 802 aa11.65□□□□□ -0.55
RNF4-216ENST00000511859 SFTPA2Q8IWL1 248 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms