RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 MMP2P08253 660 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 CHRNB1P11230 501 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 PSMA3P25788 255 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 OAS2P29728 719 aaKnown RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 CSKP41240 450 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 SERPINB9P50453 376 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 ARF5P84085 180 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 EIF4HQ15056 248 aaKnown RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 FSCBQ5H9T9 825 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 DENND5AQ6IQ26 1287 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 VITQ6UXI7 678 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 UNC5AQ6ZN44 842 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 WDR5BQ86VZ2 330 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 LRRC6Q86X45 466 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 AHI1Q8N157 1196 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 OR52K1Q8NGK4 314 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 CDKL2Q92772 493 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 MTBPQ96DY7 904 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 PWWP2AQ96N64 755 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 TUBGCP5Q96RT8 1024 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 SPON2Q9BUD6 331 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 SSU72Q9NP77 194 aaKnown RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 DUS2Q9NX74 493 aaKnown RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 GGA2Q9UJY4 613 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 ANGPTL2Q9UKU9 493 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 MAD1L1Q9Y6D9 718 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.19□□□□□ -0.94
NR1I3-228ENST00000511676 FAM169AQ9Y6X4 670 aa9.19□□□□□ -0.94
NR1I3-228ENST00000511676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SPECC1L-ADORA2AF8WAN1 911 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TIMM44O43615 452 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 RRP9O43818 475 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 AVILO75366 819 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 NDST3O95803 873 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CD160O95971 181 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 GSRP00390 522 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 C1QAP02745 245 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SHBGP04278 402 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CYP17A1P05093 508 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SRPRAP08240 638 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ZNF806P0C7X5 589 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ADH5P11766 374 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TYRP14679 529 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PAMP19021 973 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CD72P21854 359 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 FCARP24071 287 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ADRA1DP25100 572 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CD86P42081 329 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 RHOAP61586 193 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PDE1BQ01064 536 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CDK18Q07002 472 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 NIPAL4Q0D2K0 466 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 LMAN2Q12907 356 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CRYMQ14894 314 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 DHCR24Q15392 516 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CYTH1Q15438 398 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SLC1A5Q15758 541 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 EML3Q32P44 896 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PITRM1Q5JRX3 1037 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PDPK2PQ6A1A2 396 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 MARK2Q7KZI7 788 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 RABEPKQ7Z6M1 372 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SLC26A11Q86WA9 606 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 AGGF1Q8N302 714 aaeCLIP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PGBD5Q8N414 524 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 DCLK2Q8N568 766 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PCDH20Q8N6Y1 951 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 PPHLN1Q8NEY8 458 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SPATA22Q8NHS9 363 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 FAM76AQ8TAV0 307 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 USP33Q8TEY7 942 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SLC44A1Q8WWI5 657 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ZSWIM3Q96MP5 696 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 TRIB3Q96RU7 358 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 FICDQ9BVA6 458 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 ADGRE3Q9BY15 652 aa9.18□□□□□ -0.94
NR1I3-228ENST00000511676 CNOT10Q9H9A5 744 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 DNAJC17Q9NVM6 304 aaKnown RBP9.18□□□□□ -0.94
NR1I3-228ENST00000511676 HACD3Q9P035 362 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms