RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	FGF11	Q92914	225 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	HES6	Q96HZ4	224 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	RPL10L	Q96L21	214 aa	Known RBP	10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF599	Q96NL3	588 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	TSGA13	Q96PP4	275 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	SLC39A8	Q9C0K1	460 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	GAREM1	Q9H706	876 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	CPNE5	Q9HCH3	593 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	HAUS2	Q9NVX0	235 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	SUSD2	Q9UGT4	822 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	PCDHGB2	Q9Y5G2	931 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	NBAS	A2RRP1	2371 aa		10.43	□□□□□ -0.74
PTPN20-222	ENST00000509774	MCF2L	O15068	1137 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	PRAMEF11	O60813	436 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF189	O75820	626 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	KRT1	P04264	644 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CD48	P09326	243 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	SRC	P12931	536 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	GNS	P15586	552 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	GABRG2	P18507	467 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CCNC	P24863	283 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	GJC1	P36383	396 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ACVRL1	P37023	503 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CDKN2B	P42772	138 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CTSO	P43234	321 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	RECQL	P46063	649 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	SERPINH1	P50454	418 aa	Known RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	PAPOLA	P51003	745 aa	Known RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CCDC15	Q0P6D6	951 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ELAVL3	Q14576	367 aa	Known RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ACCSL	Q4AC99	568 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	C4orf48	Q5BLP8	95 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	C9orf64	Q5T6V5	341 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	TIGD7	Q6NT04	549 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	DSG4	Q86SJ6	1040 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	BPHL	Q86WA6	291 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	CPNE8	Q86YQ8	564 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	TMPRSS6	Q8IU80	811 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	PQLC3	Q8N755	202 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	OR2T3	Q8NH03	318 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	PTPRN2	Q92932	1015 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	ITPKC	Q96DU7	683 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	HMCES	Q96FZ2	354 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	KCNF1	Q9H3M0	494 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	LZTFL1	Q9NQ48	299 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	PRSS16	Q9NQE7	514 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	TRIM10	Q9UDY6	481 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	AMACR	Q9UHK6	382 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	HYOU1	Q9Y4L1	999 aa		10.42	□□□□□ -0.74
PTPN20-222	ENST00000509774	TTC34	A8MYJ7	566 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	APOL1	O14791	398 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	SNAP91	O60641	907 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	MAFK	O60675	156 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	CER1	O95813	267 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	CD160	O95971	181 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	MT-CO1	P00395	513 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	TNNT1	P13805	278 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	JUP	P14923	745 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	TGM2	P21980	687 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	CES1	P23141	567 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	PRKCH	P24723	683 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	GARS	P41250	739 aa	Known RBP	10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	CSNK1D	P48730	415 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	RENBP	P51606	427 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	SNRPD1	P62314	119 aa	Known RBP	10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	ARF5	P84085	180 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	RAD51	Q06609	339 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	GALNT2	Q10471	571 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	GRM3	Q14832	879 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	PDK1	Q15118	436 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	HLA-B	Q31612	363 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	C4orf17	Q53FE4	359 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	MEI1	Q5TIA1	1274 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	FAM46C	Q5VWP2	391 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	NCBP2-AS2	Q69YL0	99 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	MFSD7	Q6UXD7	560 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	SPOCD1	Q6ZMY3	1216 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF354C	Q86Y25	554 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	REXO1L1P	Q8IX06	675 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	BBS5	Q8N3I7	341 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	PLD5	Q8N7P1	536 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	TMIE	Q8NEW7	156 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	NSMCE1	Q8WV22	266 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	OR8D1	Q8WZ84	308 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	PRCC	Q92733	491 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	SIPA1	Q96FS4	1042 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	MRGPRX1	Q96LB2	322 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	ZNF830	Q96NB3	372 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	FAM129B	Q96TA1	746 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	NRSN2	Q9GZP1	204 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	GOLPH3	Q9H4A6	298 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	CD93	Q9NPY3	652 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	ITM2C	Q9NQX7	267 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	KCND1	Q9NSA2	647 aa		10.41	□□□□□ -0.74
PTPN20-222	ENST00000509774	ETNK2	Q9NVF9	386 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms