RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TNFP01375 233 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 ACVRL1P37023 503 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 PTK2Q05397 1052 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 RAD51Q06609 339 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 C16orf72Q14CZ0 275 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 LRRC14Q15048 493 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 AGERQ15109 404 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 CLPPQ16740 277 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 WSCD2Q2TBF2 565 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 TMEM52BQ4KMG9 183 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 C14orf28Q4W4Y0 310 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 TRIM65Q6PJ69 517 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 GDPD4Q6W3E5 623 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 TMPRSS9Q7Z410 1059 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 BNIPLQ7Z465 357 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 DRC7Q8IY82 874 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 Q8N9G6 341 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 NKD1Q969G9 470 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 MIB2Q96AX9 1013 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 WDR92Q96MX6 357 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 CATSPER2Q96P56 530 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 TBCBQ99426 244 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 APOOQ9BUR5 198 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 AKAP7Q9P0M2 348 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 KLQ9UEF7 1012 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 ZDHHC9Q9Y397 364 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 MFHAS1Q9Y4C4 1052 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 PCDHGA3Q9Y5H0 932 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ZSCAN5CA6NGD5 496 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-211ENST00000508546 HGSO14964 777 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-211ENST00000508546 CPNE6O95741 557 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 TIMP2P16035 220 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 COL8A1P27658 744 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
NEDD9-211ENST00000508546 KRT9P35527 623 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 DCTP40126 519 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 USP8P40818 1118 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 GABRB2P47870 512 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 UQCRFS1P47985 274 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ARSDP51689 593 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
NEDD9-211ENST00000508546 B4GALNT1Q00973 533 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ELP6Q0PNE2 266 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ARHGEF7Q14155 803 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 INPP5AQ14642 412 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 TCEA2Q15560 299 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ARHGAP44Q17R89 818 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 MAP9Q49MG5 647 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 PHF19Q5T6S3 580 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 GJB7Q6PEY0 223 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 RD3Q7Z3Z2 195 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 PIM3Q86V86 326 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 FAM46DQ8NEK8 389 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 PDXPQ96GD0 296 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 GDAP1L1Q96MZ0 367 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 TAAR9Q96RI9 348 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 WRAP53Q9BUR4 548 aaKnown RBP9.47□□□□□ -0.89
NEDD9-211ENST00000508546 TTYH3Q9C0H2 523 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 SEMA6CQ9H3T2 930 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 NDFIP2Q9NV92 336 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 TMEM248Q9NWD8 314 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 LRIT1Q9P2V4 623 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 APEX2Q9UBZ4 518 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 COQ6Q9Y2Z9 468 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ESPL1Q14674 2120 aa9.47□□□□□ -0.89
NEDD9-211ENST00000508546 ZNF891A8MT65 544 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 AGRPO00253 132 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 TNFRSF10CO14798 259 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 CAPN5O15484 640 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 B4GAT1O43505 415 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 AGFG2O95081 481 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 FGF3P11487 239 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 CCL4P13236 92 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 RHOQP17081 205 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 ITIH2P19823 946 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 UGT1A3P35503 534 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 FLT3P36888 993 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 MTM1Q13496 603 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 NR1D2Q14995 579 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 ATXN7L2Q5T6C5 722 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 ARCQ7LC44 396 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 ZNF438Q7Z4V0 828 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 TAF8Q7Z7C8 310 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms