RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 MT-ND1P03886 318 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 CAPNS1P04632 268 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 GRIA4P48058 902 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 ARHGAP1Q07960 439 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 TTLL4Q14679 1199 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 STXBP5Q5T5C0 1151 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 IQSEC1Q6DN90 963 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 HEATR4Q86WZ0 1026 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 GPC2Q8N158 579 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 DHRSXQ8N5I4 330 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 DOK1Q99704 481 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 TP63Q9H3D4 680 aaPredicted RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 TASP1Q9H6P5 420 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 MARCH7Q9H992 704 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 UBP1Q9NZI7 540 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 SUCOQ9UBS9 1254 aaKnown RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 ZDHHC2Q9UIJ5 367 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 B3GNT3Q9Y2A9 372 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 TIMM13Q9Y5L4 95 aaPredicted RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 HSPA8P11142 646 aaKnown RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 CYP2F1P24903 491 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 PTPN9P43378 593 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 SOWAHAQ2M3V2 549 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 SH3YL1Q96HL8 342 aaPredicted RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 ZNF518BQ9C0D4 1074 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 GTSE1Q9NYZ3 720 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 IFT80Q9P2H3 777 aaPredicted RBP12.78□□□□□ -0.36
DDR1-262ENST00000508312 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 TNFSF13BQ9Y275 285 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 CITO14578 2027 aa12.78□□□□□ -0.36
DDR1-262ENST00000508312 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.36
DDR1-262ENST00000508312 H3BRB1 525 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 HBP1O60381 514 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 TSPAN1O60635 241 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 TADA2AO75478 443 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 TGFB3P10600 412 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 GOT1P17174 413 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 MAGP20916 626 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 ELK4P28324 431 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 POLR2IP36954 125 aaKnown RBP12.77□□□□□ -0.36
DDR1-262ENST00000508312 SLC7A2P52569 658 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 ZNF143P52747 638 aaPredicted RBP12.77□□□□□ -0.36
DDR1-262ENST00000508312 LSM3P62310 102 aaKnown RBP12.77□□□□□ -0.36
DDR1-262ENST00000508312 GALNT2Q10471 571 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 FAM219BQ5XKK7 198 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.36
DDR1-262ENST00000508312 AKAP14Q86UN6 197 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 CNPY3Q9BT09 278 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 SPAG4Q9NPE6 437 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 MOCS1Q9NZB8 636 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 IFT52Q9Y366 437 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 RAP2CQ9Y3L5 183 aa12.77□□□□□ -0.36
DDR1-262ENST00000508312 MEIS3P2A8K0S8 358 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 FAM155AB1AL88 458 aaPredicted RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 ALOX5P09917 674 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 NDUFV1P49821 464 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 PAGE2BQ5JRK9 111 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 ZNF534Q76KX8 674 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SPPL2CQ8IUH8 684 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 PARP8Q8N3A8 854 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 CNTD1Q8N815 330 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SNX19Q92543 992 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 NT5C1AQ9BXI3 368 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 MRPL40Q9NQ50 206 aaKnown RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 TAF4O00268 1085 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SYNCRIPO60506 623 aaKnown RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 ALDH4A1P30038 563 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 CDH5P33151 784 aaPredicted RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 TNK2Q07912 1038 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SPCS2Q15005 226 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 PDK2Q15119 407 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SLCO6A1Q86UG4 719 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 IFNEQ86WN2 208 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 SEPT8Q92599 483 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 TDRD1Q9BXT4 1180 aaKnown RBP12.77□□□□□ -0.37
DDR1-262ENST00000508312 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.37
DDR1-262ENST00000508312 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
DDR1-262ENST00000508312 MSI1O43347 362 aaKnown RBP12.76□□□□□ -0.37
DDR1-262ENST00000508312 JRKO75564 520 aa12.76□□□□□ -0.37
DDR1-262ENST00000508312 EIF2S1P05198 315 aaKnown RBP12.76□□□□□ -0.37
DDR1-262ENST00000508312 AFF1P51825 1210 aaKnown RBP12.76□□□□□ -0.37
DDR1-262ENST00000508312 TPD52P55327 224 aaPredicted RBP12.76□□□□□ -0.37
DDR1-262ENST00000508312 COPZ1P61923 177 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms