RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 EFL1Q7Z2Z2 1120 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 RAB44Q7Z6P3 723 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 GPR180Q86V85 440 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLVS1Q8IUQ0 354 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 APOBEC3FQ8IUX4 373 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 PLD6Q8N2A8 252 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 PELI3Q8N2H9 469 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF786Q8N393 782 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FIBCD1Q8N539 461 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCDC185Q8N715 623 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM47BQ8NA70 645 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 KDM1BQ8NB78 822 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 MINDY2Q8NBR6 621 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 SHKBP1Q8TBC3 707 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 AGR3Q8TD06 166 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 TSPEARQ8WU66 669 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 KCTD4Q8WVF5 259 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 LRTOMTQ8WZ04 291 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 KCTD13Q8WZ19 329 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 LPGAT1Q92604 370 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 TFAP2CQ92754 450 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 WNT8BQ93098 351 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 POP5Q969H6 163 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATP6V1E2Q96A05 226 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM149B1Q96BN6 582 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ISOC1Q96CN7 298 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 HDAC11Q96DB2 347 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATXN7L3BQ96GX2 97 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 WNK4Q96J92 1243 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 PIWIL1Q96J94 861 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FEM1CQ96JP0 617 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPATA33Q96N06 139 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 KLHL32Q96NJ5 620 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CNTNAP3BQ96NU0 1288 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FCRL3Q96P31 734 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CYP2S1Q96SQ9 504 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 DOK1Q99704 481 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 NPAS2Q99743 824 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 OLFM1Q99784 485 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 MCMBPQ9BTE3 642 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM62Q9BVG3 475 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 C1QTNF1Q9BXJ1 281 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 OXCT2Q9BYC2 517 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CNTNAP3Q9BZ76 1288 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 RAB6CQ9H0N0 254 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCM2LQ9NUG4 571 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM49BQ9NUQ9 324 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 OLAHQ9NV23 265 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF358Q9NW07 568 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM45AQ9NWC5 275 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CACNA2D2Q9NY47 1150 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ERAP1Q9NZ08 941 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM181Q9P2C4 612 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC17A6Q9P2U8 582 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZDHHC2Q9UIJ5 367 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 CNOT6Q9ULM6 557 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 UBQLN1Q9UMX0 589 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 G3BP2Q9UN86 482 aaKnown RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 NOD1Q9Y239 953 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 AFG3L2Q9Y4W6 797 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 PPP2R3BQ9Y5P8 575 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 GTF3C5Q9Y5Q8 519 aaPredicted RBP5□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC30A1Q9Y6M5 507 aa5□□□□□ -1.61
HMGB3P16-201ENST00000508037 RNF103-CHMP3A0A140T963 221 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM95CA0A1B0GW59 222 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DHRS12A0PJE2 317 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C7orf72A4D263 438 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 IQCA1LA6NCM1 817 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM64A6NGJ6 449 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C16orf96A6NNT2 1141 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 KCNU1A8MYU2 1149 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TARM1B6A8C7 271 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 E7ENX8 843 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 H0YAE9 185 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANGPT2O15123 496 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLOCKO15516 846 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DLX3O60479 287 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 HUS1O60921 280 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATP6V1G1O75348 118 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 RASAL1O95294 804 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C22orf31O95567 290 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LTA4HP09960 611 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 OCM2P0CE71 109 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 OCMP0CE72 109 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC35E2BP0CK96 405 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 HSD17B1P14061 328 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 HOXB6P17509 224 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARF4P18085 180 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TFE3P19532 575 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TCN1P20061 433 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCSK6P29122 969 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADORA2BP29275 332 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TKTP29401 623 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LRPAP1P30533 357 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CYP2C18P33260 490 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADRA1BP35368 520 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GNL1P36915 607 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLCN5P51795 746 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GEMP55040 296 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms