RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MAGEA13PA6NCF6 341 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 TBKBP1A7MCY6 615 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 WASH4PA8MWX3 477 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 AP3B1O00203 1094 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 AIM2O14862 343 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SYN3O14994 580 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 AHCYL1O43865 530 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ZNF189O75820 626 aaPredicted RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 LYNP07948 512 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 CCDC166P0CW27 439 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SLC2A3P11169 496 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 CRABP2P29373 138 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 NDST2P52849 883 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SLC12A2P55011 1212 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 CDKN2DP55273 166 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 RPS24P62847 133 aaKnown RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 DSG1Q02413 1049 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 KLF10Q13118 480 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 TRIP4Q15650 581 aaPredicted RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 KIAA0930Q6ICG6 404 aaPredicted RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 TMCO2Q7Z6W1 182 aaPredicted RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 OR13C4Q8NGS5 318 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SIKE1Q9BRV8 207 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 UBE2OQ9C0C9 1292 aaKnown RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 GPAMQ9HCL2 828 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 GKN1Q9NS71 199 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 IGSF5Q9NSI5 407 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 NSMCE4AQ9NXX6 385 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ALDH1A1P00352 501 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ATXN1LP0C7T5 689 aaKnown RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 COX4I1P13073 169 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 PAMP19021 973 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ITGAXP20702 1163 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SGSHP51688 502 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 CCL23P55773 120 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 NRG1Q02297 640 aaPredicted RBP14.59□□□□□ -0.07
DDX41-208ENST00000507955 UGP2Q16851 508 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 C6orf163Q5TEZ5 329 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 EBF3Q9H4W6 596 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 S100A14Q9HCY8 104 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ATP13A1Q9HD20 1204 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 IL37Q9NZH6 218 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 SSX2IPQ9Y2D8 614 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 RAP2CQ9Y3L5 183 aa14.59□□□□□ -0.07
DDX41-208ENST00000507955 C5orf42Q9H799 3197 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 IGLV3-10A0A075B6K4 115 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 HEATR9A2RTY3 570 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 MOXD2PA6NHM9 499 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 TMEM114B3SHH9 223 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 ARVCFO00192 962 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 RNASEH1O60930 286 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 MT-CO1P00395 513 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SELPP16109 830 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 FGFR3P22607 806 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 HTR7P34969 479 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SERINC3Q13530 473 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 SEL1L3Q68CR1 1132 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SPON2Q9BUD6 331 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 PAPOLBQ9NRJ5 636 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 ADAMTS6Q9UKP5 1117 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 LRFN2Q9ULH4 789 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 FAM92AA1XBS5 289 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 HDAC3O15379 428 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 LDB2O43679 373 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 GALTP07902 379 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 HDCP19113 662 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 DNAJB2P25686 324 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 RGRP47804 291 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 ATXN3P54252 364 aaPredicted RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 ATN1P54259 1190 aaPredicted RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 GPR17Q13304 367 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SEMA3AQ14563 771 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SH2D4BQ5SQS7 431 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 GPR158Q5T848 1215 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 LPCAT4Q643R3 524 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 PGM2L1Q6PCE3 622 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 TRIM67Q6ZTA4 783 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 CILP2Q8IUL8 1156 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 RYBPQ8N488 228 aaPredicted RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 RNF148Q8N7C7 305 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 EXT2Q93063 718 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 WBP2Q969T9 261 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 STN1Q9H668 368 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 SORCS3Q9UPU3 1222 aa14.58□□□□□ -0.08
DDX41-208ENST00000507955 FNDC3AQ9Y2H6 1198 aaKnown RBP14.58□□□□□ -0.08
DDX41-208ENST00000507955 CCNT2O60583 730 aaKnown RBP14.57□□□□□ -0.08
DDX41-208ENST00000507955 PQBP1O60828 265 aaKnown RBP14.57□□□□□ -0.08
DDX41-208ENST00000507955 TACR2P21452 398 aa14.57□□□□□ -0.08
DDX41-208ENST00000507955 MAGEA11P43364 429 aa14.57□□□□□ -0.08
DDX41-208ENST00000507955 PRAMEP78395 509 aa14.57□□□□□ -0.08
DDX41-208ENST00000507955 SFT2D3Q587I9 215 aa14.57□□□□□ -0.08
DDX41-208ENST00000507955 FBXO48Q5FWF7 155 aa14.57□□□□□ -0.08
DDX41-208ENST00000507955 SLC30A9Q6PML9 568 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms