RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PODXLO00592 558 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ASNA1O43681 348 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SOAT2O75908 522 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SRFP11831 508 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 TACR1P25103 407 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 NSFP46459 744 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GALCP54803 685 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 LILRA4P59901 499 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 CD83Q01151 205 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ADCY2Q08462 1091 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 DMPKQ09013 629 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ELAVL2Q12926 359 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 RPS6KA1Q15418 735 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 UPP1Q16831 310 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SFRP5Q5T4F7 317 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 LCLAT1Q6UWP7 414 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 PHYKPLQ8IUZ5 450 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 FAM9CQ8IZT9 166 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 DEFB123Q8N688 67 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SLC4A11Q8NBS3 891 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GALNT6Q8NCL4 622 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 DBF4BQ8NFT6 615 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 WHAMMQ8TF30 809 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 HDAC7Q8WUI4 952 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 FATE1Q969F0 183 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ACDQ96AP0 544 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 C18orf25Q96B23 403 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 COLEC11Q9BWP8 271 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 OSBPL10Q9BXB5 764 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 RXFP1Q9HBX9 757 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 HOMER3Q9NSC5 361 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 RBM12Q9NTZ6 932 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 PACSIN2Q9UNF0 486 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SIT1Q9Y3P8 196 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 MTF2Q9Y483 593 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ZSCAN5CA6NGD5 496 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 H3BQF6 201 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SLC7A4O43246 635 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ATP5OP48047 213 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 DNA2P51530 1060 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 NOMO3P69849 1222 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 FGL2Q14314 439 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GPNMBQ14956 572 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SHHQ15465 462 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 FAM109BQ6ICB4 259 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 C11orf63Q6NUN7 778 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 PSRC1Q6PGN9 363 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 NUP54Q7Z3B4 507 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SLFN11Q7Z7L1 901 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ZDHHC17Q8IUH5 632 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GPR65Q8IYL9 337 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ABI1Q8IZP0 508 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 ZNF619Q8N2I2 560 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 NAT16Q8N8M0 369 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GLIS1Q8NBF1 620 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SLC20A1Q8WUM9 679 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 LINC01599Q8WXQ3 324 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 HDAC10Q969S8 669 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 RAX2Q96IS3 184 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 CNDP2Q96KP4 475 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SDCBP2Q9H190 292 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 WNT8AQ9H1J5 351 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SMYD3Q9H7B4 428 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 GMPR2Q9P2T1 348 aaKnown RBP7.25□□□□□ -1.25
CLCN3-206ENST00000507875 TBC1D29Q9UFV1 150 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 CDH9Q9ULB4 789 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 SNX9Q9Y5X1 595 aa7.25□□□□□ -1.25
CLCN3-206ENST00000507875 UBA6A0AVT1 1052 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 HMX3A6NHT5 357 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 CYB561D2O14569 222 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SYN3O14994 580 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 IRAK2O43187 625 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 FRS3O43559 492 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PRLP01236 227 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 AMHP03971 560 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 WEE2P0C1S8 567 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 TMEM11P17152 192 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PCSK1P29120 753 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 GNL1P36915 607 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ACADSBP45954 432 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 GABRB2P47870 512 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SCNN1GP51170 649 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 NDST1P52848 882 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC6A3Q01959 620 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 C17orf67Q0P5P2 114 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SMARCB1Q12824 385 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 TARDBPQ13148 414 aaKnown RBP eCLIP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ZNF268Q14587 947 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SOWAHAQ2M3V2 549 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 KHDC1Q4VXA5 237 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 C8orf74Q6P047 294 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ZNF771Q7L3S4 317 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC9B2Q86UD5 537 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 EPHX4Q8IUS5 362 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 HERC6Q8IVU3 1022 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SPNS2Q8IVW8 549 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ADGRF2Q8IZF7 708 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms