RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 NTAN1Q96AB6 310 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 PDXPQ96GD0 296 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 APOOQ9BUR5 198 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 GANQ9H2C0 597 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 LRRN3Q9H3W5 708 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 PCDH12Q9NPG4 1184 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 SAMSN1Q9NSI8 373 aaKnown RBP23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 TAB2Q9NYJ8 693 aa23.22■■□□□ 1.31
CALCOCO2-209ENST00000507076 TMEM110-MUSTN1A8MSY1 372 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 RASA4BC9J798 803 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 RASA4O43374 803 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 RFC1P35251 1148 aaPredicted RBP23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 KLK7P49862 253 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 KCNC4Q03721 635 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 INO80DQ53TQ3 878 aaPredicted RBP23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 SLFN11Q7Z7L1 901 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 Q8N9G6 341 aaPredicted RBP23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 DAAM1Q9Y4D1 1078 aa23.21■■□□□ 1.31
CALCOCO2-209ENST00000507076 CREB3O43889 395 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 NOBOXO60393 691 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 PRKCGP05129 697 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 JMJD7P0C870 316 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 KRT3P12035 628 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 GPD1P21695 349 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 CCKBRP32239 447 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 PTP4A2Q12974 167 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 CYTH1Q15438 398 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 UGP2Q16851 508 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 LINC00303Q3SY05 128 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 EFHC2Q5JST6 749 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 USP53Q70EK8 1073 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 CCNJLQ8IV13 435 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 WDR92Q96MX6 357 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 TMEM74Q96NL1 305 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 SELENOOQ9BVL4 669 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 LOXL2Q9Y4K0 774 aa23.2■■□□□ 1.3
CALCOCO2-209ENST00000507076 TMX2-CTNND1H3BSU7 103 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 WISP1O95388 367 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 ITIH1P19827 911 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 LIG3P49916 1009 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 SUOXP51687 545 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 YBEYP58557 167 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 SERINC3Q13530 473 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 TCP11X2Q5H9J9 407 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 CFAP58Q5T655 872 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 SCYL2Q6P3W7 929 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 WDR59Q6PJI9 974 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 SFTPA2Q8IWL1 248 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 PCDHB18PQ96TA0 734 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 TRIM4Q9C037 500 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 SUV39H2Q9H5I1 410 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 NLRC4Q9NPP4 1024 aa23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 UBA2Q9UBT2 640 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO2-209ENST00000507076 TSPAN11A1L157 253 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 CCP110O43303 1012 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 TNFP01375 233 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 SOX5P35711 763 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 MMP12P39900 470 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 POLR2FP61218 127 aaKnown RBP23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ERAP2Q6P179 960 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 TRIM72Q6ZMU5 477 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ZSWIM9Q86XI8 627 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 DNAAF5Q86Y56 855 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 PLA2G15Q8NCC3 412 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 GPR156Q8NFN8 814 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ATL2Q8NHH9 583 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 OR1E3Q8WZA6 343 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 EXTL1Q92935 676 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 SGF29Q96ES7 293 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 RBM15Q96T37 977 aaKnown RBP eCLIP23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 FAM117AQ9C073 453 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 CLSTN2Q9H4D0 955 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 FAM207AQ9NSI2 230 aaPredicted RBP23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ADAM22Q9P0K1 906 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 ACSL6Q9UKU0 697 aa23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 HEMK1Q9Y5R4 338 aaPredicted RBP23.18■■□□□ 1.3
CALCOCO2-209ENST00000507076 EPHB6O15197 1021 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 LIPCP11150 499 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 UNGP13051 313 aaPredicted RBP23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 NSFP46459 744 aaKnown RBP23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 MTM1Q13496 603 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 PARP15Q460N3 678 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 TAF8Q7Z7C8 310 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 VASH2Q86V25 355 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 CAMK1DQ8IU85 385 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 OR6C4Q8NGE1 309 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 ARHGAP9Q9BRR9 750 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 FGF22Q9HCT0 170 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 MRPL40Q9NQ50 206 aaKnown RBP23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 DACH1Q9UI36 760 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 ATP8A1Q9Y2Q0 1164 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 SDK2Q58EX2 2172 aa23.17■■□□□ 1.3
CALCOCO2-209ENST00000507076 MAST4O15021 2626 aa23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 PRAMEF33A0A0G2JMD5 474 aa23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 BUB1BO60566 1050 aaPredicted RBP23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 PRAMEF10O60809 474 aa23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 ETV5P41161 510 aa23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 JAM2P57087 298 aa23.16■■□□□ 1.3
CALCOCO2-209ENST00000507076 NFKB2Q00653 900 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms