RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 GRAMD1AQ96CP6 724 aa24.89■■□□□ 1.58
HERC4-212ENST00000505760 SYT11Q9BT88 431 aa24.89■■□□□ 1.58
HERC4-212ENST00000505760 ATP13A3Q9H7F0 1226 aa24.89■■□□□ 1.58
HERC4-212ENST00000505760 THSD1Q9NS62 852 aa24.89■■□□□ 1.58
HERC4-212ENST00000505760 SATB2Q9UPW6 733 aa24.89■■□□□ 1.58
HERC4-212ENST00000505760 COL27A1Q8IZC6 1860 aaPredicted RBP24.88■■□□□ 1.57
HERC4-212ENST00000505760 LRRC53A6NM62 1247 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 BUB1BO60566 1050 aaPredicted RBP24.88■■□□□ 1.57
HERC4-212ENST00000505760 TCEA3O75764 348 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 RNF8O76064 485 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 CTSEP14091 401 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 SERPINA4P29622 427 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 LIG3P49916 1009 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 HK3P52790 923 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 CXADRP78310 365 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 INPP5AQ14642 412 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 ELOCQ15369 112 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 ASIC2Q16515 512 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 RFX8Q6ZV50 586 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 SRLQ86TD4 932 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 TSEN2Q8NCE0 465 aaKnown RBP24.88■■□□□ 1.57
HERC4-212ENST00000505760 ATXN7L3BQ96GX2 97 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 HIC2Q96JB3 615 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 SNRNP25Q9BV90 132 aaKnown RBP24.88■■□□□ 1.57
HERC4-212ENST00000505760 PADI4Q9UM07 663 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 ATP8A1Q9Y2Q0 1164 aa24.88■■□□□ 1.57
HERC4-212ENST00000505760 PRPSAP2O60256 369 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 ALPIP09923 528 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 MMP12P39900 470 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 TCEA2Q15560 299 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 PPP6R3Q5H9R7 873 aaPredicted RBP24.87■■□□□ 1.57
HERC4-212ENST00000505760 BROXQ5VW32 411 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 ENPP7Q6UWV6 458 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 RD3Q7Z3Z2 195 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 ATL2Q8NHH9 583 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 WDR48Q8TAF3 677 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 TSACCQ96A04 125 aaPredicted RBP24.87■■□□□ 1.57
HERC4-212ENST00000505760 CCDC3Q9BQI4 270 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 APOOQ9BUR5 198 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 CINPQ9BW66 212 aaPredicted RBP24.87■■□□□ 1.57
HERC4-212ENST00000505760 SYNDIG1Q9H7V2 258 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 SP110Q9HB58 689 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 RTN4Q9NQC3 1192 aaKnown RBP24.87■■□□□ 1.57
HERC4-212ENST00000505760 GULP1Q9UBP9 304 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 OR1A2Q9Y585 309 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 ENTPD2Q9Y5L3 495 aa24.87■■□□□ 1.57
HERC4-212ENST00000505760 KIF26BQ2KJY2 2108 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 TEX51A0A1B0GUA7 166 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 TMEM191CA6NGB0 347 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 DFFAO00273 331 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ATXN7O15265 892 aaPredicted RBP24.86■■□□□ 1.57
HERC4-212ENST00000505760 RASGRP1O95267 797 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 PRKCGP05129 697 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 CELA2BP08218 269 aaPredicted RBP24.86■■□□□ 1.57
HERC4-212ENST00000505760 RBMS1P29558 406 aaKnown RBP24.86■■□□□ 1.57
HERC4-212ENST00000505760 CSNK1DP48730 415 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 NFATC4Q14934 902 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ALG11Q2TAA5 492 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ANO6Q4KMQ2 910 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ZSWIM9Q86XI8 627 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ARFGAP1Q8N6T3 406 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 KCNE4Q8WWG9 221 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 SLC39A7Q92504 469 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 PEBP4Q96S96 227 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 KCTD15Q96SI1 283 aaPredicted RBP24.86■■□□□ 1.57
HERC4-212ENST00000505760 EDEM3Q9BZQ6 932 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 HAUS4Q9H6D7 363 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ASCL3Q9NQ33 180 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 SIRPGQ9P1W8 387 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 LRP4O75096 1905 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 ATMQ13315 3056 aa24.86■■□□□ 1.57
HERC4-212ENST00000505760 TK2O00142 265 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 FTLP02792 175 aaPredicted RBP24.85■■□□□ 1.57
HERC4-212ENST00000505760 PCCBP05166 539 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 ERCC2P18074 760 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 MIPP30301 263 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 RGRP47804 291 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 SPIDRQ14159 915 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 AGERQ15109 404 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 FILIP1LQ4L180 1135 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 LVRNQ6Q4G3 990 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 ARL10Q8N8L6 244 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 PCDH19Q8TAB3 1148 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 KLQ9UEF7 1012 aa24.85■■□□□ 1.57
HERC4-212ENST00000505760 GZMAP12544 262 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 UCNP55089 124 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 SRP54P61011 504 aaKnown RBP24.84■■□□□ 1.57
HERC4-212ENST00000505760 BCL2L1Q07817 233 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 AFMIDQ63HM1 303 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 FOXR1Q6PIV2 292 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 GKN2Q86XP6 184 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 PSTKQ8IV42 348 aaKnown RBP24.84■■□□□ 1.57
HERC4-212ENST00000505760 ARHGAP12Q8IWW6 846 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 SDR16C5Q8N3Y7 309 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 FNIP1Q8TF40 1166 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 WDR92Q96MX6 357 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 TRIM7Q9C029 511 aa24.84■■□□□ 1.57
HERC4-212ENST00000505760 CNOT8Q9UFF9 292 aaKnown RBP24.84■■□□□ 1.57
HERC4-212ENST00000505760 SMTNL1A8MU46 457 aa24.83■■□□□ 1.57
HERC4-212ENST00000505760 PRB1P04280 392 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms