RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CPZQ66K79 652 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 LCLAT1Q6UWP7 414 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 GDF7Q7Z4P5 450 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
LSM6-204ENST00000504181 PCDH20Q8N6Y1 951 aaKnown RBP12.63□□□□□ -0.39
LSM6-204ENST00000504181 DCAF4L2Q8NA75 395 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 DHX58Q96C10 678 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 TM6SF2Q9BZW4 377 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
LSM6-204ENST00000504181 FCF1Q9Y324 198 aaKnown RBP12.63□□□□□ -0.39
LSM6-204ENST00000504181 DGKBQ9Y6T7 804 aa12.63□□□□□ -0.39
LSM6-204ENST00000504181 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ANKUB1A6NFN9 424 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 AREL1O15033 823 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 LRCH4O75427 683 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 UGT2B4P06133 528 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 VARSP26640 1264 aaKnown RBP12.62□□□□□ -0.39
LSM6-204ENST00000504181 PPM1FP49593 454 aaPredicted RBP12.62□□□□□ -0.39
LSM6-204ENST00000504181 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
LSM6-204ENST00000504181 CDH4P55283 916 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ELOAQ14241 798 aaKnown RBP12.62□□□□□ -0.39
LSM6-204ENST00000504181 TESK1Q15569 626 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 WSCD2Q2TBF2 565 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ALFQ53S48 1182 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 OR7D4Q8NG98 312 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ZDHHC1Q8WTX9 485 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 FAXDC2Q96IV6 333 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 KLHL32Q96NJ5 620 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 C7orf25Q9BPX7 421 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 FGF22Q9HCT0 170 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 ASF1BQ9NVP2 202 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 HECAQ9UBI9 543 aaPredicted RBP12.62□□□□□ -0.39
LSM6-204ENST00000504181 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
LSM6-204ENST00000504181 MYO7BQ6PIF6 2116 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 PIPSLA2A3N6 862 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 TMEM202A6NGA9 273 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 PPP6R2O75170 966 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 ECEL1O95672 775 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 PCCBP05166 539 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 TIMP2P16035 220 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 GPR3P46089 330 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 CCL11P51671 97 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 MAP7Q14244 749 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 KRT39Q6A163 491 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 TMEM71Q6P5X7 295 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 SPNS3Q6ZMD2 512 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 C17orf82Q86X59 251 aaPredicted RBP12.61□□□□□ -0.39
LSM6-204ENST00000504181 OR56A4Q8NGH8 313 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 TMEM174Q8WUU8 243 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 SNRNP40Q96DI7 357 aaKnown RBP12.61□□□□□ -0.39
LSM6-204ENST00000504181 HSFY1Q96LI6 401 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 CEP44Q9C0F1 390 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 SIK2Q9H0K1 926 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 ST7Q9NRC1 585 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 MOSPD1Q9UJG1 213 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
LSM6-204ENST00000504181 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 PIKFYVEQ9Y2I7 2098 aa12.61□□□□□ -0.39
LSM6-204ENST00000504181 KRIT1O00522 736 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 CREG1O75629 220 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 CALCAP01258 141 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 FGF1P05230 155 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 SLC2A3P11169 496 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 KRT13P13646 458 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 ZNF28P17035 718 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 BMP6P22004 513 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 CCR1P32246 355 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 RNASE9P60153 205 aaKnown RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 EIF4EBP2Q13542 120 aaPredicted RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 ZRSR2Q15696 482 aaKnown RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 TFAP2DQ7Z6R9 452 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 NANOS1Q8WY41 292 aaKnown RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 DPYSL5Q9BPU6 564 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 ULBP3Q9BZM4 244 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
LSM6-204ENST00000504181 POPDC2Q9HBU9 364 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 MLXIPLQ9NP71 852 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms