RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CCNI2Q6ZMN8 369 aaPredicted RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 FRMD8Q9BZ67 464 aaPredicted RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 SLC6A17Q9H1V8 727 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 RPL26L1Q9UNX3 145 aaKnown RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 TTC28Q96AY4 2481 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 PI15O43692 258 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 CPP00450 1065 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 FGF1P05230 155 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 TNFRSF8P28908 595 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 DGKEP52429 567 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 SESN2P58004 480 aaPredicted RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 POLR2LP62875 67 aaKnown RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 HIF1AQ16665 826 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 QPCTQ16769 361 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 EIF1ADQ8N9N8 165 aaKnown RBP20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 ARRDC3Q96B67 414 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 PPP1R16AQ96I34 528 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 SMIM14Q96QK8 99 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 PHTF1Q9UMS5 762 aa20.53■□□□□ 0.88
CDC42SE2-206ENST00000503291 TCRBV21S2A2A0A5A6 115 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 TSPAN11A1L157 253 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 AP3B1O00203 1094 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 MID1O15344 667 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 MYBL2P10244 700 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 ITGB7P26010 798 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 MAGEA3P43357 314 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 ARL4CP56559 192 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 UGP2Q16851 508 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 PARS2Q7L3T8 475 aaKnown RBP20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 TTC7BQ86TV6 843 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 PDIK1LQ8N165 341 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 SPEM1Q8N4L4 309 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 MRGPRX1Q96LB2 322 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 FMO2Q99518 471 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 POLMQ9NP87 494 aaPredicted RBP20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 DYRK4Q9NR20 520 aa20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 MTRF1LQ9UGC7 380 aaKnown RBP20.52■□□□□ 0.88
CDC42SE2-206ENST00000503291 ADH1BP00325 375 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 TIMP2P16035 220 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 CTPS1P17812 591 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 C5AR1P21730 350 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 GRIA4P48058 902 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PTPRRQ15256 657 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 MSS51Q4VC12 460 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 CERCAMQ5T4B2 595 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 DENND2CQ68D51 928 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 GSPT2Q8IYD1 628 aaKnown RBP20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 RAB21Q9UL25 225 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 TMEM221A6NGB7 291 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 M0R296 226 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PLK4O00444 970 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PPFIA2O75334 1257 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PRKCGP05129 697 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 TUBBP07437 444 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PIRTP0C851 137 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 MCM3P25205 808 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 MTAPQ13126 283 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 MSLNQ13421 630 aaPredicted RBP20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 LRRC73Q5JTD7 316 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 AADATQ8N5Z0 425 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 SIPA1Q96FS4 1042 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 BFARQ9NZS9 450 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 PPIL1Q9Y3C6 166 aa20.51■□□□□ 0.87
CDC42SE2-206ENST00000503291 A0A0J9YYE9 177 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 TRBC1P01850 177 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 ALPIP09923 528 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 C7P10643 843 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 NDUFV2P19404 249 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 MGAT1P26572 445 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 NPY2RP49146 381 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 FBXL19Q6PCT2 694 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 SCRN2Q96FV2 425 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 FOXP3Q9BZS1 431 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 DLGAP2Q9P1A6 1054 aa20.5■□□□□ 0.87
CDC42SE2-206ENST00000503291 BANF1O75531 89 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 DNTTP04053 509 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 GABRG2P18507 467 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 AOC1P19801 751 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 DRD3P35462 400 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 CRADDP78560 199 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 BBS9Q3SYG4 887 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 CENPUQ71F23 418 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 ERN2Q76MJ5 926 aaKnown RBP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 CCDC25Q86WR0 208 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 AGGF1Q8N302 714 aaeCLIP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 HMGB4Q8WW32 186 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 HDAC8Q9BY41 377 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 SDR42E2A6NKP2 422 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 UPK3BL1B0FP48 263 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 UPK3BL2E5RIL1 263 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 FAM153BP0C7A2 387 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 XPAP23025 273 aaPredicted RBP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 HNF1BP35680 557 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 P2RY2P41231 377 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 ABL2P42684 1182 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 ZBTB16Q05516 673 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 DHX9Q08211 1270 aaKnown RBP20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 CNTN1Q12860 1018 aa20.49■□□□□ 0.87
CDC42SE2-206ENST00000503291 PDIA2Q13087 525 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms