RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 IFI44Q8TCB0 444 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 TSACCQ96A04 125 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 TUBGCP5Q96RT8 1024 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 DUSP23Q9BVJ7 150 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 CINPQ9BW66 212 aaPredicted RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 NRSN2Q9GZP1 204 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 MRPL47Q9HD33 250 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 DONSONQ9NYP3 566 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 APOBEC3BQ9UH17 382 aaKnown RBP16.38■□□□□ 0.21
SCLT1-204ENST00000503215 OR1A2Q9Y585 309 aa16.38■□□□□ 0.21
SCLT1-204ENST00000503215 RP1P56715 2156 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 A0A087WV48 116 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 H3BRJ5 948 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 TRAFD1O14545 582 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-204ENST00000503215 BRINP1O60477 761 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 TSHRP16473 764 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 GM2AP17900 193 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 TGM2P21980 687 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 SCNN1BP51168 640 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 SUOXP51687 545 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 YPEL5P62699 121 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 ELP6Q0PNE2 266 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 DPYSL2Q16555 572 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 ALG11Q2TAA5 492 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 ZCCHC8Q6NZY4 707 aaKnown RBP16.37■□□□□ 0.21
SCLT1-204ENST00000503215 BRAT1Q6PJG6 821 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 MACC1Q6ZN28 852 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 EFL1Q7Z2Z2 1120 aaKnown RBP16.37■□□□□ 0.21
SCLT1-204ENST00000503215 CACTIN-AS1Q8N1I8 211 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
SCLT1-204ENST00000503215 ECHDC3Q96DC8 303 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 TRIM11Q96F44 468 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 CSPG4P5Q96PW8 444 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCLT1-204ENST00000503215 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 SPASTQ9UBP0 616 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 CAPN11Q9UMQ6 739 aa16.37■□□□□ 0.21
SCLT1-204ENST00000503215 LOC400499M0QZD8 3231 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 YY2O15391 372 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 LZTS3O60299 673 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-204ENST00000503215 GYPCP04921 128 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 SERPING1P05155 500 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PCCBP05166 539 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 CYP1A2P05177 515 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 ZBED6P86452 979 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 SLC25A11Q02978 314 aaKnown RBP16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PPARDQ03181 441 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 MMRN1Q13201 1228 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PTK2BQ14289 1009 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 LBRQ14739 615 aaKnown RBP16.36■□□□□ 0.21
SCLT1-204ENST00000503215 GRM3Q14832 879 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PTPRRQ15256 657 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 BOLA3Q53S33 107 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PERM1Q5SV97 790 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 CFAP58Q5T655 872 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 ERAP2Q6P179 960 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 HID1Q8IV36 788 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PELI3Q8N2H9 469 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 IL12RB2Q99665 862 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 APOOQ9BUR5 198 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 NUP85Q9BW27 656 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 ATP13A3Q9H7F0 1226 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 PCDH18Q9HCL0 1135 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 SCUBE2Q9NQ36 999 aa16.36■□□□□ 0.21
SCLT1-204ENST00000503215 A0A1W2PNU3 283 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 LMO7DNF2Z398 122 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 TPP1O14773 563 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 CSO75390 466 aaKnown RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 RECQL5O94762 991 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 CD48P09326 243 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 IL4RP24394 825 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 SERPINA4P29622 427 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 EIF2S3P41091 472 aaKnown RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 DUSP3P51452 185 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 BCL2L1Q07817 233 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 NSUN2Q08J23 767 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 RFTN1Q14699 578 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 ENPP7Q6UWV6 458 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 LIPIQ6XZB0 460 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 RD3Q7Z3Z2 195 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 MAPK15Q8TD08 544 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 BTN2A2Q8WVV5 523 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 PSKH2Q96QS6 385 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 BOCQ9BWV1 1114 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 SLC13A1Q9BZW2 595 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 SEPT3Q9UH03 358 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 SALL4Q9UJQ4 1053 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 ANAPC7Q9UJX3 599 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 PCDHGC4Q9Y5F7 938 aa16.35■□□□□ 0.21
SCLT1-204ENST00000503215 BZW2Q9Y6E2 419 aaKnown RBP16.35■□□□□ 0.21
SCLT1-204ENST00000503215 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-204ENST00000503215 MAFKO60675 156 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 MPOP05164 745 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 GP1BAP07359 652 aa16.34■□□□□ 0.21
SCLT1-204ENST00000503215 CR2P20023 1033 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms