RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 EVX1P49640 407 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CLNS1AP54105 237 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 YARSP54577 528 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 USP14P54578 494 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MFAP1P55081 439 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 INHBCP55103 352 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 HOXA4Q00056 320 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF92Q03936 586 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GOLGA8FQ08AF8 430 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 LSAMPQ13449 338 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MTM1Q13496 603 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 BMPR2Q13873 1038 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SLC1A5Q15758 541 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCDC85BQ15834 202 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 MAN2A1Q16706 1144 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 COL28A1Q2UY09 1125 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 C3orf38Q5JPI3 329 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DACT2Q5SW24 774 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZKSCAN2Q63HK3 967 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SEL1L3Q68CR1 1132 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MRNIPQ6NTE8 343 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DPY19L2P1Q6NXN4 242 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TEX43Q6ZNM6 134 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF280BQ86YH2 543 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PRSS58Q8IYP2 241 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCDC82Q8N4S0 544 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MCUQ8NE86 351 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 OR2L5Q8NG80 312 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FGF13Q92913 245 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 RAB1CQ92928 201 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF486Q96H40 463 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 FAM46AQ96IP4 442 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 C3orf30Q96M34 536 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MAGEB18Q96M61 343 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NEDD4LQ96PU5 975 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PUS7Q96PZ0 661 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 YME1L1Q96TA2 773 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GPR62Q9BZJ7 368 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ACTR6Q9GZN1 396 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ENY2Q9NPA8 101 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PSD3Q9NYI0 1048 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 HSPBP1Q9NZL4 362 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TBC1D7Q9P0N9 293 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PI4KBQ9UBF8 816 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SUSD2Q9UGT4 822 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF215Q9UL58 517 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 CYP8B1Q9UNU6 501 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PIAS3Q9Y6X2 628 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PCDH11XQ9BZA7 1347 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SPTBN1Q01082 2364 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 CRYBG1Q9Y4K1 1723 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TSC2P49815 1807 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 A0A0J9YVX5 310 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ARHGAP10A1A4S6 786 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZC3H12DA2A288 527 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 JRKO75564 520 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CDK14O94921 469 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SCELO95171 688 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CELF2O95319 508 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 TFF1P04155 84 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CR2P20023 1033 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CA4P22748 312 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GRNP28799 593 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 MCM7P33993 719 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CLCN7P51798 805 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 IL1RL1Q01638 556 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MBTD1Q05BQ5 628 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF155Q12901 538 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 HSDL1Q3SXM5 330 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PLK5Q496M5 336 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCDC40Q4G0X9 1142 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 C2CD6Q53TS8 623 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 BTBD8Q5XKL5 378 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NXPE4Q6UWF7 544 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TMCO3Q6UWJ1 677 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TRIM72Q6ZMU5 477 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ATG4DQ86TL0 474 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 C11orf74Q86VG3 221 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DTX1Q86Y01 620 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CREBRFQ8IUR6 639 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FAM178BQ8IXR5 827 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SMYD4Q8IYR2 804 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 PRR22Q8IZ63 422 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ANKS4BQ8N8V4 417 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 BOLLQ8N9W6 283 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 XXYLT1Q8NBI6 393 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ICA1LQ8NDH6 482 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ST13P5Q8NFI4 369 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 OR52L2PQ8NGH6 319 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GRIN3AQ8TCU5 1115 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ST7LQ8TDW4 575 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ESR2Q92731 530 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 RDH5Q92781 318 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DHX58Q96C10 678 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF501Q96CX3 271 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 C17orf77Q96MU5 243 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 BIRC8Q96P09 236 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 HERC2P3Q9BVR0 1158 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 AZI2Q9H6S1 392 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SUDS3Q9H7L9 328 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms