RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 NAT6Q93015 286 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 TRIM11Q96F44 468 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 CRELD1Q96HD1 420 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 UBL7Q96S82 380 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SYT11Q9BT88 431 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SNRNP25Q9BV90 132 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 BOCQ9BWV1 1114 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 HAUS4Q9H6D7 363 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 POLR1BQ9H9Y6 1135 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SP110Q9HB58 689 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 PDFQ9HBH1 243 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 PCDH12Q9NPG4 1184 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 COQ6Q9Y2Z9 468 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 SCINQ9Y6U3 715 aa11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 DSPP15924 2871 aaKnown RBP11.86□□□□□ -0.51
NUDCD3-211ENST00000497978 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 TMEM191CA6NGB0 347 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 DFFAO00273 331 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 YY2O15391 372 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 TCEA3O75764 348 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 RASGRP1O95267 797 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ALPIP09923 528 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 MYBL1P10243 752 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 C6P13671 934 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 TSHRP16473 764 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ERCC2P18074 760 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 TGM2P21980 687 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 HCAR3P49019 387 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 LIG3P49916 1009 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ERVPABLB-1P60509 514 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 POLR2LP62875 67 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 KLHL30Q0D2K2 578 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 RFTN1Q14699 578 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 CA9Q16790 459 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ISXQ2M1V0 245 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 WSCD2Q2TBF2 565 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 PPP6R3Q5H9R7 873 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 BROXQ5VW32 411 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ENPP7Q6UWV6 458 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 RBM44Q6ZP01 1051 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 CAMK1DQ8IU85 385 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 HID1Q8IV36 788 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 SDR16C5Q8N3Y7 309 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 FCRL3Q96P31 734 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 KCTD15Q96SI1 283 aaPredicted RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 LGMNQ99538 433 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 PRORYQ9H606 182 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 SLC24A3Q9HC58 644 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 MRPL47Q9HD33 250 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 CNOT8Q9UFF9 292 aaKnown RBP11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 ATP8A1Q9Y2Q0 1164 aa11.85□□□□□ -0.51
NUDCD3-211ENST00000497978 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 PCCBP05166 539 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 RBMS1P29558 406 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 MIPP30301 263 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 MMP12P39900 470 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 PRKCIP41743 596 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 RENBPP51606 427 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 HK3P52790 923 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 IL10RBQ08334 325 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 MTM1Q13496 603 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 INPP5AQ14642 412 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 NFATC4Q14934 902 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 AGERQ15109 404 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 AFMIDQ63HM1 303 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 RD3Q7Z3Z2 195 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 GKN2Q86XP6 184 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 SPACA3Q8IXA5 215 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 SLC35F3Q8IY50 421 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 LZTR1Q8N653 840 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 TSEN2Q8NCE0 465 aaKnown RBP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 TSACCQ96A04 125 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 PEBP4Q96S96 227 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 CLPBQ9H078 707 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 THSD1Q9NS62 852 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 MYO1AQ9UBC5 1043 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 GULP1Q9UBP9 304 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 KLQ9UEF7 1012 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 PNMA8BQ9ULN7 279 aaPredicted RBP11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 RAI2Q9Y5P3 530 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 ATRXP46100 2492 aa11.84□□□□□ -0.51
NUDCD3-211ENST00000497978 H3BRJ5 948 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms