RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RP1P56715 2156 aa14.39□□□□□ -0.11
VTI1A-209ENST00000496445 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 TLX3O43711 291 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 MT-CO3P00414 261 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 GP1BAP07359 652 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 CELA2BP08218 269 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 RARAP10276 462 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 AMPD1P23109 780 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 SERPINA4P29622 427 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 LIG3P49916 1009 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 THOP1P52888 689 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 TPM4P67936 248 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 ZBED6P86452 979 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 E2F1Q01094 437 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 SLC10A7Q0GE19 358 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 PTK2BQ14289 1009 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 RFTN1Q14699 578 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 RTP5Q14D33 572 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 ACAP1Q15027 740 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 LRRC14Q15048 493 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 AGERQ15109 404 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 IFI44Q8TCB0 444 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 HNRNPLLQ8WVV9 542 aaKnown RBP14.38□□□□□ -0.11
VTI1A-209ENST00000496445 HSPH1Q92598 858 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 CSPG4P5Q96PW8 444 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 NRSN2Q9GZP1 204 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 USP29Q9HBJ7 922 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 ANAPC7Q9UJX3 599 aa14.38□□□□□ -0.11
VTI1A-209ENST00000496445 A0A087WV48 116 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 TTC24A2A3L6 582 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-209ENST00000496445 H3BRJ5 948 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 TOR1BO14657 336 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 OPA1O60313 960 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 CYP1A2P05177 515 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 HOXB3P14651 431 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-209ENST00000496445 GM2AP17900 193 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
VTI1A-209ENST00000496445 C1orf61Q13536 156 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 PIGHQ14442 188 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-209ENST00000496445 LBRQ14739 615 aaKnown RBP14.37□□□□□ -0.11
VTI1A-209ENST00000496445 CDKN3Q16667 212 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 GUSBP11Q6P575 273 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 CPNE8Q86YQ8 564 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 LZTR1Q8N653 840 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 BTN2A2Q8WVV5 523 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 TBATAQ96M53 351 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 PSKH2Q96QS6 385 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 BOCQ9BWV1 1114 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 CLPBQ9H078 707 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 PCDH18Q9HCL0 1135 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 SPASTQ9UBP0 616 aa14.37□□□□□ -0.11
VTI1A-209ENST00000496445 BRINP1O60477 761 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 PCCBP05166 539 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 TSHRP16473 764 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 CR2P20023 1033 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 CASP14P31944 242 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 ARL4AP40617 200 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 SCNN1BP51168 640 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 AP1S1P61966 158 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 BCL2L1Q07817 233 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 ZSCAN23Q3MJ62 389 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 BOLA3Q53S33 107 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 DPPA4Q7L190 304 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 SLC35F3Q8IY50 421 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 PLA2G15Q8NCC3 412 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 CRELD1Q96HD1 420 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 ZNF599Q96NL3 588 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 OR1A2Q9Y585 309 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 AK5Q9Y6K8 562 aa14.36□□□□□ -0.11
VTI1A-209ENST00000496445 EME2A4GXA9 379 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 CFAP69A5D8W1 941 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 LMO7DNF2Z398 122 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 GOLGA6L19H0YKK7 550 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 TPP1O14773 563 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 HTRA2O43464 458 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-209ENST00000496445 MAFKO60675 156 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 CD48P09326 243 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 TGM2P21980 687 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 IL4RP24394 825 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 PEX5P50542 639 aa14.35□□□□□ -0.11
VTI1A-209ENST00000496445 DUSP3P51452 185 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms