RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 DDX56Q9NY93 547 aaKnown RBP17.69■□□□□ 0.42
RHBDD3-207ENST00000496342 COL5A1P20908 1838 aaPredicted RBP17.69■□□□□ 0.42
RHBDD3-207ENST00000496342 A0A0U1RQS6 177 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 KCNK1O00180 336 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 MATN3O15232 486 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 FLRT2O43155 660 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 TM7SF2O76062 418 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 PECAM1P16284 738 aaPredicted RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 HSPA9P38646 679 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 CDKN2BP42772 138 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 LIG3P49916 1009 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 VAV2P52735 878 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 ELP6Q0PNE2 266 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 ZBTB17Q13105 803 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 IRF4Q15306 451 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 TRIP6Q15654 476 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 KYAT3Q6YP21 454 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 SPOCD1Q6ZMY3 1216 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 NYAP1Q6ZVC0 841 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 DAAM2Q86T65 1068 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 IQCHQ86VS3 1027 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 CCDC13Q8IYE1 715 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 BBS5Q8N3I7 341 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 BAHD1Q8TBE0 780 aaPredicted RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 RHBDD1Q8TEB9 315 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 HAUS1Q96CS2 278 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 LUC7LQ9NQ29 371 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 RBM22Q9NW64 420 aaKnown RBP eCLIP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 IMPACTQ9P2X3 320 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 SAE1Q9UBE0 346 aaPredicted RBP17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 PCDHGB2Q9Y5G2 931 aa17.68■□□□□ 0.42
RHBDD3-207ENST00000496342 HTRA2O43464 458 aaPredicted RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PCDHGA12O60330 932 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 IPO7O95373 1038 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 CPP00450 1065 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 CCNCP24863 283 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PMLP29590 882 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 NAP1L1P55209 391 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PPIDQ08752 370 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 NIPAL4Q0D2K0 466 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 HNRNPDQ14103 355 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 ODF2Q5BJF6 829 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 TIGD7Q6NT04 549 aaPredicted RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 ERAP2Q6P179 960 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 DBX2Q6ZNG2 339 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PNPLA1Q8N8W4 532 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 HCAR2Q8TDS4 363 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 SAP25Q8TEE9 199 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 CENPTQ96BT3 561 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 TSGA13Q96PP4 275 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 HERPUD2Q9BSE4 406 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 MAK16Q9BXY0 300 aaKnown RBP17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 GPR27Q9NS67 375 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 B4GALT6Q9UBX8 382 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PCDHB9Q9Y5E1 797 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 HS3ST3A1Q9Y663 406 aa17.67■□□□□ 0.42
RHBDD3-207ENST00000496342 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 ZNF487B1APH4 448 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 FPGTO14772 594 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 JCHAINP01591 159 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 ITGAVP06756 1048 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 PDHA1P08559 390 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 CCNB1P14635 433 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 CTPS1P17812 591 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 GM2AP17900 193 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 MX2P20592 715 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 FOXK2Q01167 660 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 AP1B1Q10567 949 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 OVGP1Q12889 678 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 PDE1CQ14123 709 aaPredicted RBP17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 FZD2Q14332 565 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 TAZQ16635 292 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 DPPA4Q7L190 304 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 KANSL1Q7Z3B3 1105 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 LRRC49Q8IUZ0 686 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 ZNF830Q96NB3 372 aaPredicted RBP17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 OLFM3Q96PB7 478 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 LENG8Q96PV6 779 aaPredicted RBP17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 ERVMER34-1Q9H9K5 563 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 UCKL1Q9NWZ5 548 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 SEPT10Q9P0V9 454 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 PNMA8BQ9ULN7 279 aaPredicted RBP17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
RHBDD3-207ENST00000496342 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 MACROD2A1Z1Q3 448 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 PJA2O43164 708 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 LZTS3O60299 673 aaPredicted RBP17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 CST8O60676 142 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 MAGEC1O60732 1142 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 SOCS5O75159 536 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 PGLSO95336 258 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 PCCBP05166 539 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 ALPIP09923 528 aa17.65■□□□□ 0.42
RHBDD3-207ENST00000496342 ATXN1LP0C7T5 689 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms