RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CALB1P05937 261 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 TPM2P07951 284 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 RGRP47804 291 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 LIG3P49916 1009 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 HK3P52790 923 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CCL7P80098 99 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CLN3Q13286 438 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 SERINC3Q13530 473 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 INPP5AQ14642 412 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 TMEM52BQ4KMG9 183 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CDKAL1Q5VV42 579 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 MON1BQ7L1V2 547 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 PHF13Q86YI8 300 aaPredicted RBP12.75□□□□□ -0.37
SKA1-205ENST00000494518 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CAMK1DQ8IU85 385 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 SFTPA2Q8IWL1 248 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 ARL14Q8N4G2 192 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 ARL10Q8N8L6 244 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 PLA2G15Q8NCC3 412 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 C3orf20Q8ND61 904 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 PDXPQ96GD0 296 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 APOOQ9BUR5 198 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 CPEB1Q9BZB8 566 aaKnown RBP12.75□□□□□ -0.37
SKA1-205ENST00000494518 EDEM3Q9BZQ6 932 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 RETREG1Q9H6L5 497 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 DKK3Q9UBP4 350 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 KLQ9UEF7 1012 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 FZD10Q9ULW2 581 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 GPR34Q9UPC5 381 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 MFHAS1Q9Y4C4 1052 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 DAAM1Q9Y4D1 1078 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
SKA1-205ENST00000494518 SIGLEC16A6NMB1 481 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 BUB1BO60566 1050 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 RASGRP1O95267 797 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 ZNF143P52747 638 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 TPI1P60174 286 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 SKOR1P84550 965 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 OGDHQ02218 1023 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 ELP6Q0PNE2 266 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 SRSF6Q13247 344 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 NFATC4Q14934 902 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 ELOCQ15369 112 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 UGP2Q16851 508 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 PARP15Q460N3 678 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 INO80DQ53TQ3 878 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 IGF2-ASQ6U949 168 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 DNAAF5Q86Y56 855 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 FSTL5Q8N475 847 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 Q8N9G6 341 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 ENOX1Q8TC92 643 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 TTC9Q92623 222 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 SUDS3Q9H7L9 328 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 CATSPERBQ9H7T0 1116 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 ATXN7L1Q9ULK2 861 aaPredicted RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 ZFC3H1O60293 1989 aaKnown RBP12.74□□□□□ -0.37
SKA1-205ENST00000494518 HECTD1Q9ULT8 2610 aa12.74□□□□□ -0.37
SKA1-205ENST00000494518 A0A1W2PQM1 296 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 TCRBV5S1A1TA0A578 114 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 A8MX80 341 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 D6RAR5 112 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 NTN3O00634 580 aaPredicted RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 ALPIP09923 528 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 HTR1BP28222 390 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 MMP12P39900 470 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 BLKP51451 505 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 GSCP56915 257 aaPredicted RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 YBEYP58557 167 aaPredicted RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 TGIF1Q15583 401 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 CA9Q16790 459 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 ERAP2Q6P179 960 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 DCUN1D2Q6PH85 259 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 UMODL1-AS1Q8N2C9 162 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 FBXO39Q8N4B4 442 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 SCG3Q8WXD2 468 aaKnown RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 OR1E3Q8WZA6 343 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 TBATAQ96M53 351 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 SLC39A8Q9C0K1 460 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 LRRC19Q9H756 370 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 PDFQ9HBH1 243 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 MRPL40Q9NQ50 206 aaKnown RBP12.73□□□□□ -0.37
SKA1-205ENST00000494518 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms