RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 KRT1P04264 644 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 WNT1P04628 370 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 CFIP05156 583 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3HP0C7X1 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GNSP15586 552 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GRIA4P48058 902 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 RACK1P63244 317 aaKnown RBP8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GRIK2Q13002 908 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 FGL2Q14314 439 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GRM3Q14832 879 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF284Q2VY69 593 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 STPG1Q5TH74 334 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3GQ6DHY5 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 ALG1LQ6GMV1 187 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3CQ6IPX1 549 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 NEK5Q6P3R8 708 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GDPD4Q6W3E5 623 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 SRLQ86TD4 932 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 HORMAD1Q86X24 394 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 ZSWIM9Q86XI8 627 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 KATNAL2Q8IYT4 538 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 ALDH16A1Q8IZ83 802 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TBC1D3Q8IZP1 549 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-217ENST00000494395 HDAC11Q96DB2 347 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 ECHDC3Q96DC8 303 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 KLHL32Q96NJ5 620 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 OLFM3Q96PB7 478 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TUBGCP5Q96RT8 1024 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 DESI2Q9BSY9 194 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-217ENST00000494395 MIR1-1HGQ9H1L0 117 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 DYRK4Q9NR20 520 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 GGT7Q9UJ14 662 aa8.86□□□□□ -0.99
ITGB1-217ENST00000494395 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 KNL1Q8NG31 2342 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 DNAH14Q0VDD8 3507 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 MATN3O15232 486 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 HTRA2O43464 458 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RNGTTO60942 597 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 IPO7O95373 1038 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 BMP2P12643 396 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CCNCP24863 283 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CTNNA2P26232 953 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CTNNA1P35221 906 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 NUDT1P36639 197 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 HSPA9P38646 679 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ID4P47928 161 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CSNK1EP49674 416 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 PEX5P50542 639 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RENBPP51606 427 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 AFF3P51826 1226 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CCZ1BP86790 482 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RAD51Q06609 339 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ADCY2Q08462 1091 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CCDC15Q0P6D6 951 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 HNRNPDQ14103 355 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 IHHQ14623 411 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 IFI16Q16666 785 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 SEL1L3Q68CR1 1132 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 NAPEPLDQ6IQ20 393 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 FBXL19Q6PCT2 694 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 LAYNQ6UX15 382 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 NPNTQ6UXI9 565 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 SPOCD1Q6ZMY3 1216 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 DAAM2Q86T65 1068 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 NT5DC3Q86UY8 548 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 CAMK1DQ8IU85 385 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 LRRC8AQ8IWT6 810 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RYBPQ8N488 228 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 TMEM145Q8NBT3 493 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 OR2I1PQ8NGU4 316 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 HCAR2Q8TDS4 363 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ALG3Q92685 438 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RAB7BQ96AH8 199 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ZNF641Q96N77 438 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-217ENST00000494395 SLC6A18Q96N87 628 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 NUDCD1Q96RS6 583 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 RTKNQ9BST9 563 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ZDHHC5Q9C0B5 715 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 SUV39H2Q9H5I1 410 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 GRPEL1Q9HAV7 217 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 TMEM9BQ9NQ34 198 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 DMTF1Q9Y222 760 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 ITM2BQ9Y287 266 aa8.85□□□□□ -0.99
ITGB1-217ENST00000494395 hCG_1818297A0A087WSY0 165 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 A0A1B0GVT2 93 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 A0A1W2PQU0 124 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 C4orf47A7E2U8 309 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 GOLGA6L6A8MZA4 724 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 UPK3BL1B0FP48 263 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 UPK3BL2E5RIL1 263 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 APOL1O14791 398 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 VILLO15195 856 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 ARHGAP6O43182 974 aa8.84□□□□□ -0.99
ITGB1-217ENST00000494395 TSPAN6O43657 245 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms