RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 ZSCAN30Q86W11 494 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 LRRC49Q8IUZ0 686 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 PNPLA1Q8N8W4 532 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 ACRBPQ8NEB7 543 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 DENND6BQ8NEG7 585 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 RHBDD1Q8TEB9 315 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
PDCD11-206ENST00000493610 KRT35Q92764 455 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
PDCD11-206ENST00000493610 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 NT5MQ9NPB1 228 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
PDCD11-206ENST00000493610 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 A0A0U1RQS6 177 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 SPTY2D1-AS1A0A0U1RR47 76 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-206ENST00000493610 SDC3O75056 442 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 TM7SF2O76062 418 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 PRLP01236 227 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 HLA-DQB2P05538 268 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 MMP2P08253 660 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 PDHA1P08559 390 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 FTH1P19P0C7X4 201 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 CCNCP24863 283 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 SERPINA4P29622 427 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 HSPA9P38646 679 aaKnown RBP13.74□□□□□ -0.21
PDCD11-206ENST00000493610 GRK6P43250 576 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 LIG3P49916 1009 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 RENBPP51606 427 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 DSC2Q02487 901 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 BCL2L1Q07817 233 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 FOXC1Q12948 553 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 ZBTB17Q13105 803 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 IRF4Q15306 451 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 ZNF542PQ5EBM4 170 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 MARC1Q5VT66 337 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 DPPA4Q7L190 304 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 MAP7D3Q8IWC1 876 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 RHOT1Q8IXI2 618 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 PIH1D2Q8WWB5 315 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 SKA1Q96BD8 255 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 CNTNAP3BQ96NU0 1288 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 LGMNQ99538 433 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 IL12RB2Q99665 862 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 CNTNAP3Q9BZ76 1288 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
PDCD11-206ENST00000493610 LY6G6EA0A0G2JKS1 128 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 TRIM38O00635 465 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 NEMP1O14524 444 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PJA2O43164 708 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 SOCS5O75159 536 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PIAS2O75928 621 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 KRT1P04264 644 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 KRT10P13645 584 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PECAM1P16284 738 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 LHCGRP22888 699 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 DGKAP23743 735 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 NOP2P46087 812 aaKnown RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PPIDQ08752 370 aaKnown RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 ELP6Q0PNE2 266 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 ZNF235Q14590 738 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 IFI16Q16666 785 aaKnown RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 C11orf63Q6NUN7 778 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 B4GALNT4Q76KP1 1039 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PTAR1Q7Z6K3 402 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 CHCHD4Q8N4Q1 142 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 SEMA3CQ99985 751 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 TCEAL2Q9H3H9 227 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 SCUBE2Q9NQ36 999 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-206ENST00000493610 B4GALT6Q9UBX8 382 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 U3KQA8 63 aa13.73□□□□□ -0.21
PDCD11-206ENST00000493610 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
PDCD11-206ENST00000493610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
PDCD11-206ENST00000493610 CFAP69A5D8W1 941 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 FAM221BA6H8Z2 402 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 BTNL10A8MVZ5 291 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 A8MX80 341 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 KCNK1O00180 336 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 YKT6O15498 198 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 PSTPIP1O43586 416 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 MAGEC1O60732 1142 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 PGLSO95336 258 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 TNNT1P13805 278 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 CCNB1P14635 433 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 RABIFP47224 123 aa13.72□□□□□ -0.21
PDCD11-206ENST00000493610 IFI35P80217 286 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms