RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 KCTD5Q9NXV2 234 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 TAB2Q9NYJ8 693 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 GGT7Q9UJ14 662 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ACSL6Q9UKU0 697 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 FZD10Q9ULW2 581 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SATB2Q9UPW6 733 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SIK3Q9Y2K2 1263 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ACTL7AQ9Y615 435 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 DGKBQ9Y6T7 804 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 A0A1W2PQ67 120 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 K7ENP7 123 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 TNFRSF10CO14798 259 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MUSKO15146 869 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MYF5P13349 255 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 CTSEP14091 401 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 KELP23276 732 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 POLR2LP62875 67 aaKnown RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MTM1Q13496 603 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 SPIDRQ14159 915 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 RFTN1Q14699 578 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 NFATC4Q14934 902 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 CYTH1Q15438 398 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 KLHL40Q2TBA0 621 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 RAB6CQ53S08 254 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 TAF1BQ53T94 588 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 C3orf38Q5JPI3 329 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 ATXN7L2Q5T6C5 722 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 INO80CQ6PI98 192 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 PCSK4Q6UW60 755 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MON1BQ7L1V2 547 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 ZNF354CQ86Y25 554 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 PSTKQ8IV42 348 aaKnown RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 NEK11Q8NG66 645 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 HMCESQ96FZ2 354 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 TMEM74Q96NL1 305 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 PCDHB18PQ96TA0 734 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 AGPAT1Q99943 283 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 NCAPGQ9BPX3 1015 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 CCDC3Q9BQI4 270 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 STRADBQ9C0K7 418 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 CLPBQ9H078 707 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 RAB6CQ9H0N0 254 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 VPS16Q9H269 839 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 LRRC19Q9H756 370 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MBNL1Q9NR56 388 aaKnown RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 LHX3Q9UBR4 397 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 UBA2Q9UBT2 640 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 APPL1Q9UKG1 709 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 MYO6Q9UM54 1294 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 ITM2BQ9Y287 266 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 HELZ2Q9BYK8 2649 aaKnown RBP9.21□□□□□ -0.94
HDAC3-212ENST00000492407 ASXL3Q9C0F0 2248 aa9.21□□□□□ -0.94
HDAC3-212ENST00000492407 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 A0A1W2PNU3 283 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ARHGAP42A6NI28 874 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 CCP110O43303 1012 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PRAMEF11O60813 436 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 TNFP01375 233 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PRB1P04280 392 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 CCKBRP32239 447 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 TRIM23P36406 574 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 HCAR3P49019 387 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 KIAA1024LP59773 190 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 SRP54P61011 504 aaKnown RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 C1orf61Q13536 156 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 IRF4Q15306 451 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 CLPPQ16740 277 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 WSCD2Q2TBF2 565 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ZFYVE27Q5T4F4 411 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ACAD10Q6JQN1 1059 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 DNAJC24Q6P3W2 148 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 SCYL2Q6P3W7 929 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 OGFOD3Q6PK18 319 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 RBM43Q6ZSC3 357 aaKnown RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 RBFAQ8N0V3 343 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 TTC9Q92623 222 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 WDR92Q96MX6 357 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 GFM1Q96RP9 751 aaKnown RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ERGIC2Q96RQ1 377 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 RBM15Q96T37 977 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 APOOQ9BUR5 198 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 MAGEB5Q9BZ81 275 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 TCEAL2Q9H3H9 227 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ATP13A3Q9H7F0 1226 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 SUDS3Q9H7L9 328 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PDFQ9HBH1 243 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PCDH12Q9NPG4 1184 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 NLRC4Q9NPP4 1024 aa9.2□□□□□ -0.94
HDAC3-212ENST00000492407 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-212ENST00000492407 ATP8A1Q9Y2Q0 1164 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms