RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TBC1D3DA0A087WVF3 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3IA0A087WXS9 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3EA0A087X179 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3KA0A087X1G2 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 FAM149AA5PLN7 773 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3FA6NER0 549 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3LB9A6J9 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 MATN3O15232 486 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 MAP3K6O95382 1288 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3HP0C7X1 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 HSPA9P38646 679 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 RXRGP48443 463 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 DNA2P51530 1060 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TAS2R38P59533 333 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 SNRPD1P62314 119 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 POM121L1PQ3SYA9 428 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 PIP5KL1Q5T9C9 394 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 FAM46CQ5VWP2 391 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3GQ6DHY5 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3CQ6IPX1 549 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 AADACL2Q6P093 401 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 IQCHQ86VS3 1027 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TBC1D3Q8IZP1 549 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 SLC35F6Q8N357 371 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 TEX26Q8N6G2 289 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 MFSD2AQ8NA29 543 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 OR2AP1Q8NGE2 309 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 GDAP1L1Q96MZ0 367 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 HEMGNQ9BXL5 484 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 LHX3Q9UBR4 397 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 SEPT3Q9UH03 358 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 AMACRQ9UHK6 382 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 DMTF1Q9Y222 760 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 RAXQ9Y2V3 346 aa15.18■□□□□ 0.02
CDC42SE1-205ENST00000491825 ATRXP46100 2492 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 TRABD2BA6NFA1 517 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 C1QTNF3-AMACRE9PGA6 284 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 RNF103O00237 685 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 ENC1O14682 589 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 ITGAVP06756 1048 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 MAT2AP31153 395 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 NUDT1P36639 197 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 RECQLP46063 649 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 ARRB1P49407 418 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 ACADVLP49748 655 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 RENBPP51606 427 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 RHOAP61586 193 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 XRCC4Q13426 336 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 PRKD1Q15139 912 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 CYTH1Q15438 398 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 NPNTQ6UXI9 565 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 LEKR1Q6ZMV7 388 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 PRPF39Q86UA1 669 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 BBS5Q8N3I7 341 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 TMEM145Q8NBT3 493 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 LRIG1Q96JA1 1093 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 CNDP2Q96KP4 475 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 CINPQ9BW66 212 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 SAE1Q9UBE0 346 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-205ENST00000491825 HACD1B0YJ81 288 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 IGSF6O95976 241 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 PRNPP04156 253 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 CSNK1DP48730 415 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCNHP51946 323 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 NSUN2Q08J23 767 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 SLC10A7Q0GE19 358 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 OVGP1Q12889 678 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 BNIP3Q12983 259 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 ZNF235Q14590 738 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCDC157Q569K6 752 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 SLC45A4Q5BKX6 768 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 MARC1Q5VT66 337 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 C19orf48Q6RUI8 117 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 DPY19L3Q6ZPD9 716 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 TMPRSS12Q86WS5 348 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 OXR1Q8N573 874 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 EID2Q8N6I1 236 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 CCNYQ8ND76 341 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 TMIEQ8NEW7 156 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 VOPP1Q96AW1 172 aa15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 QKIQ96PU8 341 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42SE1-205ENST00000491825 LGMNQ99538 433 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms