RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 HSD3B7Q9H2F3 369 aa15.69■□□□□ 0.1
COL2A1-207ENST00000490609 SUV39H2Q9H5I1 410 aa15.69■□□□□ 0.1
COL2A1-207ENST00000490609 EVA1BQ9NVM1 165 aa15.69■□□□□ 0.1
COL2A1-207ENST00000490609 OR1A2Q9Y585 309 aa15.69■□□□□ 0.1
COL2A1-207ENST00000490609 RELNP78509 3460 aa15.69■□□□□ 0.1
COL2A1-207ENST00000490609 IGSF6O95976 241 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 RBMS1P29558 406 aaKnown RBP15.68■□□□□ 0.1
COL2A1-207ENST00000490609 MMP12P39900 470 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 LIG3P49916 1009 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 RALGDSQ12967 914 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 LRRC14Q15048 493 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 CA9Q16790 459 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 CT47A1Q5JQC4 288 aaPredicted RBP15.68■□□□□ 0.1
COL2A1-207ENST00000490609 TRIM72Q6ZMU5 477 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 TMPRSS9Q7Z410 1059 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 CAMK1DQ8IU85 385 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 HID1Q8IV36 788 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 GPR156Q8NFN8 814 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 CCDC74AQ96AQ1 378 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 LIN37Q96GY3 246 aaPredicted RBP15.68■□□□□ 0.1
COL2A1-207ENST00000490609 SYT11Q9BT88 431 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 SIRPGQ9P1W8 387 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 GULP1Q9UBP9 304 aa15.68■□□□□ 0.1
COL2A1-207ENST00000490609 SPENQ96T58 3664 aaKnown RBP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 CCDC187A0A096LP49 1063 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 TMEM202A6NGA9 273 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 CREB3O43889 395 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 HGFP14210 728 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 SRP54P61011 504 aaKnown RBP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 NFATC4Q14934 902 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 TGIF1Q15583 401 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 PARP15Q460N3 678 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 TAF1BQ53T94 588 aaPredicted RBP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 SCYL2Q6P3W7 929 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 FOXR1Q6PIV2 292 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 OGFOD3Q6PK18 319 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 LVRNQ6Q4G3 990 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 ENPP7Q6UWV6 458 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 CYP4V2Q6ZWL3 525 aaPredicted RBP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 ARHGAP12Q8IWW6 846 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 TP53INP2Q8IXH6 220 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 FSTL5Q8N475 847 aaPredicted RBP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 ARL10Q8N8L6 244 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 EXD3Q8N9H8 876 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 NAT6Q93015 286 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL2A1-207ENST00000490609 SELENOOQ9BVL4 669 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 FOXP3Q9BZS1 431 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 SLC39A8Q9C0K1 460 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 NUP62CLQ9H1M0 184 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 GPATCH2LQ9NWQ4 482 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 TAS2R14Q9NYV8 317 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 DAAM1Q9Y4D1 1078 aa15.67■□□□□ 0.1
COL2A1-207ENST00000490609 PYCARD-AS1I3L0S3 204 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 PRAMEF11O60813 436 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 FUCA1P04066 466 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 ITGA2BP08514 1039 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 SLC5A2P31639 672 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 UGT1A5P35504 534 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 STAT1P42224 750 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 NSFP46459 744 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 RPIAP49247 311 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 COPB1P53618 953 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 SPIDRQ14159 915 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 SYCP1Q15431 976 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 LINC00303Q3SY05 128 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 ARHGAP36Q6ZRI8 547 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 RBM43Q6ZSC3 357 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 RD3Q7Z3Z2 195 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 DNAAF5Q86Y56 855 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 SDR16C5Q8N3Y7 309 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 TSEN2Q8NCE0 465 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 OR1E3Q8WZA6 343 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 GLMNQ92990 594 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 ECHDC3Q96DC8 303 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 PDXPQ96GD0 296 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 CELF6Q96J87 481 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 MCEEQ96PE7 176 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 PEBP4Q96S96 227 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 AGPAT1Q99943 283 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 LGR4Q9BXB1 951 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 MRPL40Q9NQ50 206 aaKnown RBP15.66■□□□□ 0.1
COL2A1-207ENST00000490609 LMBRD1Q9NUN5 540 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 DACH1Q9UI36 760 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 DGKBQ9Y6T7 804 aa15.66■□□□□ 0.1
COL2A1-207ENST00000490609 LRRC10BA6NIK2 292 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 TMEM110-MUSTN1A8MSY1 372 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 D6RAR5 112 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 J3QKU1 62 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 TRAFD1O14545 582 aaPredicted RBP15.65■□□□□ 0.1
COL2A1-207ENST00000490609 CALB1P05937 261 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 TRIM23P36406 574 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 MLLT3P42568 568 aaPredicted RBP15.65■□□□□ 0.1
COL2A1-207ENST00000490609 PAPOLAP51003 745 aaKnown RBP15.65■□□□□ 0.1
COL2A1-207ENST00000490609 SUOXP51687 545 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 RAD51Q06609 339 aa15.65■□□□□ 0.1
COL2A1-207ENST00000490609 ZFP36L1Q07352 338 aaKnown RBP15.65■□□□□ 0.1
COL2A1-207ENST00000490609 ELP6Q0PNE2 266 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms