RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CREB3O43889 395 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 CALB1P05937 261 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 C6P13671 934 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 THOP1P52888 689 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 YBEYP58557 167 aaPredicted RBP11.86□□□□□ -0.51
ACTN4-206ENST00000489451 PTK2BQ14289 1009 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 PARP15Q460N3 678 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 ARHGAP40Q5TG30 622 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 SCYL2Q6P3W7 929 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 RBM44Q6ZP01 1051 aaKnown RBP11.86□□□□□ -0.51
ACTN4-206ENST00000489451 ARHGAP12Q8IWW6 846 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 TP53INP2Q8IXH6 220 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 PCDH19Q8TAB3 1148 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 CXorf40AQ8TE69 158 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 CASKIN2Q8WXE0 1202 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 TSACCQ96A04 125 aaPredicted RBP11.86□□□□□ -0.51
ACTN4-206ENST00000489451 ARHGEF26Q96DR7 871 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
ACTN4-206ENST00000489451 AGPAT1Q99943 283 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 SLC39A8Q9C0K1 460 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 ABCG4Q9H172 646 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 BSNQ9UPA5 3926 aa11.86□□□□□ -0.51
ACTN4-206ENST00000489451 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PRAMEF11O60813 436 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 TCEA3O75764 348 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PTMSP20962 102 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 MMP12P39900 470 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 HK3P52790 923 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 TMPRSS3P57727 454 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PPARDQ03181 441 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 NFATC4Q14934 902 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 AGERQ15109 404 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 UGP2Q16851 508 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 FAXCQ5TGI0 409 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 ARHGAP36Q6ZRI8 547 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PRICKLE2Q7Z3G6 844 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 CAMK1DQ8IU85 385 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 MCOLN2Q8IZK6 566 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 NPWQ8N729 165 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PDXPQ96GD0 296 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 ERGIC2Q96RQ1 377 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 CNPY3Q9BT09 278 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 TRIM7Q9C029 511 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 SUV39H2Q9H5I1 410 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 THSD1Q9NS62 852 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 NCKIPSDQ9NZQ3 722 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 SIRPGQ9P1W8 387 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 UBA2Q9UBT2 640 aaPredicted RBP11.85□□□□□ -0.51
ACTN4-206ENST00000489451 PADI4Q9UM07 663 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 DAAM1Q9Y4D1 1078 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
ACTN4-206ENST00000489451 ARHGEF17Q96PE2 2063 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 LRRC10BA6NIK2 292 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ENO4A6NNW6 628 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 TOR1BO14657 336 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 EFSO43281 561 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ATMINO43313 823 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ANXA6P08133 673 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 LIG3P49916 1009 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 PEX5P50542 639 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 PAPOLAP51003 745 aaKnown RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 TYRO3Q06418 890 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 CLN3Q13286 438 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 INPP5AQ14642 412 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 LRRC14Q15048 493 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 E4F1Q66K89 784 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 IRF2BP2Q7Z5L9 587 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 HID1Q8IV36 788 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ARL10Q8N8L6 244 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 TSEN2Q8NCE0 465 aaKnown RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 HCAR2Q8TDS4 363 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 OR1E3Q8WZA6 343 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 NAT6Q93015 286 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 CCDC74AQ96AQ1 378 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 ECHDC3Q96DC8 303 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 PCMTD1Q96MG8 357 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 SNRNP25Q9BV90 132 aaKnown RBP11.84□□□□□ -0.51
ACTN4-206ENST00000489451 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 CATSPERBQ9H7T0 1116 aa11.84□□□□□ -0.51
ACTN4-206ENST00000489451 BOD1L1Q8NFC6 3051 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms