RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 DPY19L3Q6ZPD9 716 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 Q6ZVU0 165 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 KDELC2Q7Z4H8 507 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SLC26A11Q86WA9 606 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 LPCAT1Q8NF37 534 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ST13P5Q8NFI4 369 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-220ENST00000489318 OR13J1Q8NGT2 312 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 BRSK1Q8TDC3 778 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 PIH1D2Q8WWB5 315 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 CDKL2Q92772 493 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 DNASE1L2Q92874 299 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 LRIG1Q96JA1 1093 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ZNF778Q96MU6 729 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ZNF641Q96N77 438 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-220ENST00000489318 LYSMD1Q96S90 227 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 MCMBPQ9BTE3 642 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 PHF7Q9BWX1 381 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-220ENST00000489318 CIPCQ9C0C6 399 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 HACD3Q9P035 362 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 CTNNAL1Q9UBT7 734 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SLC8A2Q9UPR5 921 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 PPIL1Q9Y3C6 166 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 STARD13Q9Y3M8 1113 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 ACTL7BQ9Y614 415 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
C9orf3-220ENST00000489318 A0A0J9YYE9 177 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 CXorf49A8MYA2 514 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 POC1B-GALNT4F8VUJ3 575 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 KAT7O95251 611 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 PIGNO95427 931 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 POP4O95707 220 aaKnown RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 TRBC1P01850 177 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 PAMP19021 973 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 GRIA2P42262 883 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 ARCN1P48444 511 aaKnown RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 ZNF140P52738 457 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 RAD51Q06609 339 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 TAF1AQ15573 450 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 LEXMQ3ZCV2 418 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 NAIF1Q69YI7 327 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 KCNMB4Q86W47 210 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 CAMK1DQ8IU85 385 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 UNC5BQ8IZJ1 945 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 OR6K2Q8NGY2 324 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 CYB5D2Q8WUJ1 264 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 SORCS1Q8WY21 1168 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 PTPRN2Q92932 1015 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 MCCC1Q96RQ3 725 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 TMEM245Q9H330 911 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 TRABDQ9H4I3 376 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 MAGEE1Q9HCI5 957 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 THAP10Q9P2Z0 257 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 HECAQ9UBI9 543 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-220ENST00000489318 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 WASF2Q9Y6W5 498 aa11.55□□□□□ -0.56
C9orf3-220ENST00000489318 TLDC2A0PJX2 215 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 SMIM23A6NLE4 172 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 TTC34A8MYJ7 566 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 NPC1O15118 1278 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 SLC7A4O43246 635 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CRTAMO95727 393 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 PRKCGP05129 697 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 INHBAP08476 426 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 HNRNPLP14866 589 aaKnown RBP eCLIP11.54□□□□□ -0.56
C9orf3-220ENST00000489318 FOSL2P15408 326 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CNTFP26441 200 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 GKP32189 559 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 MSH2P43246 934 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 RECQLP46063 649 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-220ENST00000489318 SERPINB9P50453 376 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 ST8SIA6P61647 398 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 PDE1BQ01064 536 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 SEPT6Q14141 434 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 E2F5Q15329 346 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 AAK1Q2M2I8 961 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 HNRNPA1L2Q32P51 320 aaKnown RBP11.54□□□□□ -0.56
C9orf3-220ENST00000489318 ESRP1Q6NXG1 681 aaKnown RBP11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 Q7L0L9 218 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 GALNT7Q86SF2 657 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 TRABD2AQ86V40 505 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 RASSF3Q86WH2 238 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 LMNTD2Q8IXW0 634 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CYP4X1Q8N118 509 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 TTC30BQ8N4P2 665 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 PPM1NQ8N819 430 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 CHST14Q8NCH0 376 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 MDGA1Q8NFP4 955 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 BLOC1S5Q8TDH9 187 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 HCAR2Q8TDS4 363 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 STYXQ8WUJ0 223 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 UCMAQ8WVF2 138 aa11.54□□□□□ -0.56
C9orf3-220ENST00000489318 HLA-CQ95604 372 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms