RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 CDC23Q9UJX2 597 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 ITGB1BP2Q9UKP3 347 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 RIMKLBQ9ULI2 386 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 MYO6Q9UM54 1294 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SCAF8Q9UPN6 1271 aaKnown RBP3.04□□□□□ -1.92
CALD1-221ENST00000489019 USP22Q9UPT9 525 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 CORO2BQ9UQ03 480 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 LRCH1Q9Y2L9 728 aa3.04□□□□□ -1.92
CALD1-221ENST00000489019 SCN9AQ15858 1988 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CNTNAP1P78357 1384 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SIPA1L1O43166 1804 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ARFGEF1Q9Y6D6 1849 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 A0A0U1RQG5 324 aaPredicted RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 A0A0U1RQJ8 604 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SMIM35A0A1B0GVV1 85 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MACROD2A1Z1Q3 448 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 K7ENM7 598 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PSMD9O00233 223 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CLIC2O15247 247 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PLA2G6O60733 806 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ERLIN1O75477 346 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 FLOT1O75955 427 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 AGR2O95994 175 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 AFPP02771 609 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 SERPING1P05155 500 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ICAM1P05362 532 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ARP10275 920 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 KRT13P13646 458 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 APEHP13798 732 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 GAP43P17677 238 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 TPH1P17752 444 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MUTP22033 750 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 NR2F2P24468 414 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 RPS12P25398 132 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 CERS1P27544 350 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 IL1R2P27930 398 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 NMT1P30419 496 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 PIK3CBP42338 1070 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PAFAH1B1P43034 410 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MAGEA1P43355 309 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 TM4SF4P48230 202 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CARSP49589 748 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 PRIM2P49643 509 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 GATMP50440 423 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 POLR2FP61218 127 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 SUMO2P61956 95 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 PSMC6P62333 389 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 DEUP1Q05D60 604 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CKAP4Q07065 602 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 KLHL30Q0D2K2 578 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 GPS2Q13227 327 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 FHL3Q13643 280 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 KRT72Q14CN4 511 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PDCD2Q16342 344 aaPredicted RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 MEA1Q16626 185 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 EDRF1Q3B7T1 1238 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SLC9C1Q4G0N8 1177 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 CEP55Q53EZ4 464 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 AWAT1Q58HT5 328 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 KIAA1755Q5JYT7 1200 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ARHGEF16Q5VV41 709 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 FKBP1CQ5VVH2 108 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ZNF425Q6IV72 752 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 RINT1Q6NUQ1 792 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PDXDC1Q6P996 788 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SLC2A7Q6PXP3 512 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SERPINA13PQ6UXR4 307 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MMS22LQ6ZRQ5 1243 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 TRMT1LQ7Z2T5 733 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 PCGF5Q86SE9 256 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 YAF2Q8IY57 180 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 KRT222Q8N1A0 295 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 NKAPQ8N5F7 415 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 LINC01465Q8N7H1 131 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 DEPTORQ8TB45 409 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 NEK9Q8TD19 979 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PIGOQ8TEQ8 1089 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SMCR8Q8TEV9 937 aaPredicted RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 SCARB1Q8WTV0 552 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SCFD1Q8WVM8 642 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 TRIM63Q969Q1 353 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 KIAA1191Q96A73 305 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ZC3H10Q96K80 434 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 CAPZA3Q96KX2 299 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SNX22Q96L94 193 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MBOAT7Q96N66 472 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ERGIC2Q96RQ1 377 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 REEP2Q9BRK0 252 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 MXRA8Q9BRK3 442 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 PAGR1Q9BTK6 254 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 FGFBP2Q9BYJ0 223 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 IFIH1Q9BYX4 1025 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 GLIS2Q9BZE0 524 aaPredicted RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 RPAP3Q9H6T3 665 aaPredicted RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 RAVER2Q9HCJ3 691 aaKnown RBP3.03□□□□□ -1.92
CALD1-221ENST00000489019 POLD4Q9HCU8 107 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 ARFGAP3Q9NP61 516 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 FBXO28Q9NVF7 368 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 SAGE1Q9NXZ1 904 aa3.03□□□□□ -1.92
CALD1-221ENST00000489019 RGL1Q9NZL6 768 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms