RNA–Protein interactions for RNA: ENST00000488651.5

NR1I3-214, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 3

Gene NR1I3, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-214ENST00000488651 CDKN3Q16667 212 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 PRRT3Q5FWE3 981 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 CFAP58Q5T655 872 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 TMCO4Q5TGY1 634 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 GUSBP11Q6P575 273 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 TMCO3Q6UWJ1 677 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 RNF214Q8ND24 703 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 TSACCQ96A04 125 aaPredicted RBP12.91□□□□□ -0.34
NR1I3-214ENST00000488651 ECHDC3Q96DC8 303 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 IFT43Q96FT9 208 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 SMIM14Q96QK8 99 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 TUBGCP5Q96RT8 1024 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 ATP13A3Q9H7F0 1226 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 PCDHGC4Q9Y5F7 938 aa12.91□□□□□ -0.34
NR1I3-214ENST00000488651 BZW2Q9Y6E2 419 aaKnown RBP12.91□□□□□ -0.34
NR1I3-214ENST00000488651 ITPR1Q14643 2758 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 DSPP15924 2871 aaKnown RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 H3BM21 787 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 TLX3O43711 291 aaPredicted RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 C1SP09871 688 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 CR2P20023 1033 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 SERPINA4P29622 427 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 HNF1BP35680 557 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 SSR1P43307 286 aaKnown RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 CSNK1DP48730 415 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ARSEP51690 589 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 THOP1P52888 689 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 BCL2L1Q07817 233 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ELP6Q0PNE2 266 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 TRAF2Q12933 501 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 PIGHQ14442 188 aaPredicted RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 KRT81Q14533 505 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 INPP5AQ14642 412 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ACAP1Q15027 740 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 LRRC14Q15048 493 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ALG11Q2TAA5 492 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 NCBP2-AS2Q69YL0 99 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 BRAT1Q6PJG6 821 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 MACC1Q6ZN28 852 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 DCP2Q8IU60 420 aaKnown RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 FAM174AQ8TBP5 190 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 IFI44Q8TCB0 444 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 TEKT4Q8WW24 435 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 PDXPQ96GD0 296 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 ZNF641Q96N77 438 aaPredicted RBP12.9□□□□□ -0.34
NR1I3-214ENST00000488651 PSKH2Q96QS6 385 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 NOD2Q9HC29 1040 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 B4GALT6Q9UBX8 382 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
NR1I3-214ENST00000488651 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 LZTS3O60299 673 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 RECQL5O94762 991 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 MT-CO3P00414 261 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ALPPL2P10696 532 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 TSHRP16473 764 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 TGM2P21980 687 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ADKP55263 362 aaKnown RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ILKQ13418 452 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ZNF235Q14590 738 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 IHHQ14623 411 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 GRM3Q14832 879 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ASTE1Q2TB18 679 aaPredicted RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 FAXCQ5TGI0 409 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 HID1Q8IV36 788 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 SFTPA2Q8IWL1 248 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 DCBLD1Q8N8Z6 715 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 FAM181AQ8N9Y4 354 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 HCAR2Q8TDS4 363 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 PDCD6IPQ8WUM4 868 aaKnown RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 APOOQ9BUR5 198 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 MRPL40Q9NQ50 206 aaKnown RBP12.89□□□□□ -0.35
NR1I3-214ENST00000488651 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 DKK4Q9UBT3 224 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 SEPT3Q9UH03 358 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 CLCA2Q9UQC9 943 aa12.89□□□□□ -0.35
NR1I3-214ENST00000488651 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
NR1I3-214ENST00000488651 PMS2P1A4D2B8 440 aa12.88□□□□□ -0.35
NR1I3-214ENST00000488651 MYO1FO00160 1098 aa12.88□□□□□ -0.35
NR1I3-214ENST00000488651 OPA1O60313 960 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms