RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 INSIG1O15503 277 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 ARHGAP6O43182 974 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 GJB6O95452 261 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.57
SNU13-208ENST00000488571 ALPIP09923 528 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 UCHL3P15374 230 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 CCKBRP32239 447 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 PEX5P50542 639 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 INHBCP55103 352 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 HDAC4P56524 1084 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 NFATC3Q12968 1075 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 LRRC14Q15048 493 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 CAMK4Q16566 473 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 WSCD2Q2TBF2 565 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 VWA3BQ502W6 1294 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 PRICKLE2Q7Z3G6 844 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 PHLDB2Q86SQ0 1253 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 GPR156Q8NFN8 814 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 JOSD2Q8TAC2 188 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 SLC20A1Q8WUM9 679 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 RXFP2Q8WXD0 754 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 CENPIQ92674 756 aaPredicted RBP11.46□□□□□ -0.57
SNU13-208ENST00000488571 TBC1D31Q96DN5 1066 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 C1QTNF7Q9BXJ2 289 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 LHX3Q9UBR4 397 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 NOCTQ9UK39 431 aaKnown RBP11.46□□□□□ -0.57
SNU13-208ENST00000488571 GPR34Q9UPC5 381 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 DOLKQ9UPQ8 538 aa11.46□□□□□ -0.57
SNU13-208ENST00000488571 BSNQ9UPA5 3926 aa11.46□□□□□ -0.58
SNU13-208ENST00000488571 UBR5O95071 2799 aaPredicted RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 TSPAN11A1L157 253 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 ZSCAN5CA6NGD5 496 aaPredicted RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 TMEM110-MUSTN1A8MSY1 372 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 NVLO15381 856 aaKnown RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 BUB1O43683 1085 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 RASGRP1O95267 797 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 PIGNO95427 931 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 IGSF6O95976 241 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 CYP1A1P04798 512 aaPredicted RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 CTSEP14091 401 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 CHRNB2P17787 502 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 ITGB6P18564 788 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 MMP8P22894 467 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 PTPN9P43378 593 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 CSRP3P50461 194 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 SRP54P61011 504 aaKnown RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 RHOAP61586 193 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 ZFP36L1Q07352 338 aaKnown RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 INPP5AQ14642 412 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 NFATC4Q14934 902 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 AGERQ15109 404 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 INO80DQ53TQ3 878 aaPredicted RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 ENPP7Q6UWV6 458 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 STRADAQ7RTN6 431 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 RD3Q7Z3Z2 195 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 JAMLQ86YT9 394 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 SFTPA2Q8IWL1 248 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 PYROXD2Q8N2H3 581 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 MSANTD4Q8NCY6 345 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
SNU13-208ENST00000488571 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 EXTL1Q92935 676 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 NTAN1Q96AB6 310 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 SGF29Q96ES7 293 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 PDXPQ96GD0 296 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 RBM15Q96T37 977 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNU13-208ENST00000488571 TUBGCP2Q9BSJ2 902 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 APOOQ9BUR5 198 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 TRIM4Q9C037 500 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 LRRN3Q9H3W5 708 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 STARD5Q9NSY2 213 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 PISDQ9UG56 409 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 OR1A2Q9Y585 309 aa11.45□□□□□ -0.58
SNU13-208ENST00000488571 UNC13CQ8NB66 2214 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 SPTA1P02549 2419 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 PRAMEF33A0A0G2JMD5 474 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 TERTO14746 1132 aaKnown RBP11.44□□□□□ -0.58
SNU13-208ENST00000488571 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 ITGB2P05107 769 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 LIPCP11150 499 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 WT1P19544 449 aaPredicted RBP11.44□□□□□ -0.58
SNU13-208ENST00000488571 ITIH1P19827 911 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 SDC4P31431 198 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 ETV5P41161 510 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 SUOXP51687 545 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 NFKB2Q00653 900 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 FMO1Q01740 532 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 RAD51Q06609 339 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 PTP4A2Q12974 167 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 CYTH1Q15438 398 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 UGP2Q16851 508 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 OGFOD3Q6PK18 319 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 USP53Q70EK8 1073 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 TMPRSS9Q7Z410 1059 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 GKN2Q86XP6 184 aa11.44□□□□□ -0.58
SNU13-208ENST00000488571 RTL3Q8N8U3 475 aaKnown RBP11.44□□□□□ -0.58
SNU13-208ENST00000488571 Q8N9G6 341 aaPredicted RBP11.44□□□□□ -0.58
SNU13-208ENST00000488571 MLKLQ8NB16 471 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms