RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CFAP69A5D8W1 941 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 METTL12A8MUP2 240 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 A8MX80 341 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 C10orf142B7Z368 130 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PROB1E7EW31 1015 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 NEMP1O14524 444 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 AP1G1O43747 822 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FZD6O60353 706 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PMPCBO75439 489 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ALPIP09923 528 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 TCP1P17987 556 aaKnown RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ETF1P62495 437 aaKnown RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FAM193AP78312 1265 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 RALGDSQ12967 914 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 UGP2Q16851 508 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FAXCQ5TGI0 409 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PAPD7Q5XG87 772 aaKnown RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ITPRIPL1Q6GPH6 555 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 KDELC1Q6UW63 502 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 LAYNQ6UX15 382 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ARHGEF18Q6ZSZ5 1173 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 KDELC2Q7Z4H8 507 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 TRIM69Q86WT6 500 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 RGL4Q8IZJ4 473 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 GLIS1Q8NBF1 620 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 IPMKQ8NFU5 416 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PIGKQ92643 395 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 RAB7BQ96AH8 199 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FERMT1Q9BQL6 677 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ORAI3Q9BRQ5 295 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 MLPHQ9BV36 600 aaPredicted RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FRMD8P1Q9BZ68 369 aaPredicted RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PCED1AQ9H1Q7 454 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 EBF2Q9HAK2 575 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 PCDH9Q9HC56 1237 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 FZD3Q9NPG1 666 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 B4GALT6Q9UBX8 382 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 EIF2B4Q9UI10 523 aaKnown RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 GMEB2Q9UKD1 530 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 TRHDEQ9UKU6 1024 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
UBE4B-210ENST00000488228 LAMA1P25391 3075 aa11.12□□□□□ -0.63
UBE4B-210ENST00000488228 A0A0U1RQS6 177 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 NPIPB15A6NHN6 443 aaPredicted RBP11.11□□□□□ -0.63
UBE4B-210ENST00000488228 PATE3B3GLJ2 98 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CES2O00748 559 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
UBE4B-210ENST00000488228 OPHN1O60890 802 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 PRLP01236 227 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 IFNB1P01574 187 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ETS1P14921 441 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CA4P22748 312 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 LHCGRP22888 699 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CES1P23141 567 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 MPLP40238 635 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 KCNJ1P48048 391 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CCR5P51681 352 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CCDC15Q0P6D6 951 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 OLIG2Q13516 323 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 FGL2Q14314 439 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CCNG2Q16589 344 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ZNF284Q2VY69 593 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TMEM259Q4ZIN3 620 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TCEAL6Q6IPX3 200 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 KIAA1161Q6NSJ0 714 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ERAP2Q6P179 960 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TTC27Q6P3X3 843 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 DPPA4Q7L190 304 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TSPAN33Q86UF1 283 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ACTRT1Q8TDG2 376 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 PIH1D2Q8WWB5 315 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 FOXJ1Q92949 421 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TCEAL3Q969E4 200 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 RTP4Q96DX8 246 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TRIB3Q96RU7 358 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 CA5BQ9Y2D0 317 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
UBE4B-210ENST00000488228 SAR1BQ9Y6B6 198 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms