RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 POLD3Q15054 466 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-228ENST00000487354 AGERQ15109 404 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 RD3Q7Z3Z2 195 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 ZSWIM9Q86XI8 627 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 EMC1Q8N766 993 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 PLA2G15Q8NCC3 412 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM35BQ8NCS4 154 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 SCG3Q8WXD2 468 aaKnown RBP15.49■□□□□ 0.07
MCF2L-228ENST00000487354 OR1E3Q8WZA6 343 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM159Q96B96 161 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 GDAP1L1Q96MZ0 367 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 TTYH3Q9C0H2 523 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 MAGEH1Q9H213 219 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 FGF22Q9HCT0 170 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 LHX3Q9UBR4 397 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 KLQ9UEF7 1012 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 OR12D3Q9UGF7 316 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 DGKBQ9Y6T7 804 aa15.49■□□□□ 0.07
MCF2L-228ENST00000487354 SPTAN1Q13813 2472 aaKnown RBP15.48■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 GOLGA8SH3BPF8 625 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 KDELR3O43731 214 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 LRIG2O94898 1065 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 PIGNO95427 931 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 CYP11B1P15538 503 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 PNLIPP16233 465 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 GLB1P16278 677 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 ETFBP38117 255 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 MAPK10P53779 464 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 GEMIN4P57678 1058 aaKnown RBP15.48■□□□□ 0.07
MCF2L-228ENST00000487354 ATP11AP98196 1134 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 B4GALNT1Q00973 533 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 C15orf59Q2T9L4 293 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-228ENST00000487354 ARCQ7LC44 396 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 WDR92Q96MX6 357 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 MRPL40Q9NQ50 206 aaKnown RBP15.48■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM51Q9NW97 253 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 SEPT10Q9P0V9 454 aa15.48■□□□□ 0.07
MCF2L-228ENST00000487354 HOOK1Q9UJC3 728 aaKnown RBP15.48■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM202A6NGA9 273 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 RAMP2O60895 175 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 CCL4P13236 92 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 GM2AP17900 193 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 CD82P27701 267 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 ADRA1BP35368 520 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 MMP12P39900 470 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 NOMO3P69849 1222 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 UBAP2LQ14157 1087 aaKnown RBP15.47■□□□□ 0.07
MCF2L-228ENST00000487354 SKIDA1Q1XH10 827 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 C14orf28Q4W4Y0 310 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 RWDD4Q6NW29 188 aaKnown RBP15.47■□□□□ 0.07
MCF2L-228ENST00000487354 CCDC185Q8N715 623 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 CCL4L1Q8NHW4 92 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-228ENST00000487354 EXOC2Q96KP1 924 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 B3GNT4Q9C0J1 378 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 PCDH12Q9NPG4 1184 aa15.47■□□□□ 0.07
MCF2L-228ENST00000487354 METTL5Q9NRN9 209 aaKnown RBP15.47■□□□□ 0.07
MCF2L-228ENST00000487354 B4GAT1O43505 415 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 IGSF6O95976 241 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 PCCBP05166 539 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 KIAA1024LP59773 190 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 FOXK1P85037 733 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 RALGDSQ12967 914 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 MTM1Q13496 603 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 EFHC2Q5JST6 749 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 TAF3Q5VWG9 929 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 NOP9Q86U38 636 aaKnown RBP15.46■□□□□ 0.07
MCF2L-228ENST00000487354 C17orf82Q86X59 251 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-228ENST00000487354 PTRH1Q86Y79 214 aaKnown RBP15.46■□□□□ 0.07
MCF2L-228ENST00000487354 PELI3Q8N2H9 469 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 JPH3Q8WXH2 748 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-228ENST00000487354 NKD1Q969G9 470 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 CMKLR1Q99788 373 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 TMEM168Q9H0V1 697 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 ADNPQ9H2P0 1102 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 RETREG1Q9H6L5 497 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 RDH14Q9HBH5 336 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 LRIT1Q9P2V4 623 aa15.46■□□□□ 0.07
MCF2L-228ENST00000487354 GOLGA6L4A6NEF3 574 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 B4DGG1 531 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 BUB1O43683 1085 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 NUDT21O43809 227 aaKnown RBP15.45■□□□□ 0.06
MCF2L-228ENST00000487354 BUB1BO60566 1050 aaPredicted RBP15.45■□□□□ 0.06
MCF2L-228ENST00000487354 PRKCGP05129 697 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 CR2P20023 1033 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 HTR1BP28222 390 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 LIG3P49916 1009 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 POLE2P56282 527 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 HDAC4P56524 1084 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 RHOAP61586 193 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 ELP6Q0PNE2 266 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 NR1D2Q14995 579 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 CYTH1Q15438 398 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 UGP2Q16851 508 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 CDO1Q16878 200 aa15.45■□□□□ 0.06
MCF2L-228ENST00000487354 INO80DQ53TQ3 878 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms